RNA–Protein interactions for RNA: ENST00000599305.1

CEACAM3-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 4

Gene CEACAM3, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-206ENST00000599305 HDAC5Q9UQL6 1122 aa9.05□□□□□ -0.96
CEACAM3-206ENST00000599305 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
CEACAM3-206ENST00000599305 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
CEACAM3-206ENST00000599305 ITGA6P23229 1130 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 POTEHQ6S545 545 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 ZBTB40Q9NUA8 1239 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 DDX19BQ9UMR2 479 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 ANKRD31Q8N7Z5 1873 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
CEACAM3-206ENST00000599305 ANKRD18BA2A2Z9 1011 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 IFIT5Q13325 482 aaKnown RBP9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 CCDC57Q2TAC2 916 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 ARHGAP27Q6ZUM4 889 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 CENPQQ7L2Z9 268 aaPredicted RBP9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 ANKRD18AQ8IVF6 992 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 SP8Q8IXZ3 490 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 ATP6V0A2Q9Y487 856 aa9.03□□□□□ -0.96
CEACAM3-206ENST00000599305 RTL9Q8NET4 1388 aa9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 TNRC6CQ9HCJ0 1690 aaKnown RBP9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 PNMA6EA0A0J9YXQ4 647 aa9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 ATP8B2P98198 1209 aa9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 KLHDC4Q8TBB5 520 aa9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 CDC5LQ99459 802 aaKnown RBP9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 PUS3Q9BZE2 481 aaKnown RBP9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 BSDC1Q9NW68 430 aaPredicted RBP9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 KIF13BQ9NQT8 1826 aa9.02□□□□□ -0.97
CEACAM3-206ENST00000599305 WTIPA6NIX2 430 aaPredicted RBP9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 SRGAP3O43295 1099 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 IGHMBP2P38935 993 aaKnown RBP9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 MTX1Q13505 466 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 LDHAL6AQ6ZMR3 332 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 MPHOSPH8Q99549 860 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 MINPP1Q9UNW1 487 aa9.01□□□□□ -0.97
CEACAM3-206ENST00000599305 GPSM2P81274 684 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 PTPN12Q05209 780 aaKnown RBP9□□□□□ -0.97
CEACAM3-206ENST00000599305 LRRC24Q50LG9 513 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 CCDC93Q567U6 631 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 CEP85Q6P2H3 762 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 TMC4Q7Z404 712 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 SIRT2Q8IXJ6 389 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 RTKN2Q8IZC4 609 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 MPNDQ8N594 471 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 HELBQ8NG08 1087 aaPredicted RBP9□□□□□ -0.97
CEACAM3-206ENST00000599305 NSFL1CQ9UNZ2 370 aaKnown RBP9□□□□□ -0.97
CEACAM3-206ENST00000599305 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
CEACAM3-206ENST00000599305 RIPOR2Q9Y4F9 1068 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 SLX4Q8IY92 1834 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
CEACAM3-206ENST00000599305 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
CEACAM3-206ENST00000599305 NFKBIEO00221 500 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 PRELPP51888 382 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 SOGA3Q5TF21 947 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 SSH3Q8TE77 659 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 TMX4Q9H1E5 349 aaPredicted RBP8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 COPRSQ9NQ92 184 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 CNNM1Q9NRU3 951 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 POLLQ9UGP5 575 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 COL4A1P02462 1669 aa8.99□□□□□ -0.97
CEACAM3-206ENST00000599305 COL11A2P13942 1736 aaPredicted RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 SNAP23O00161 211 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 EYA2O00167 538 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 TAF5LO75529 589 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 FKBP4Q02790 459 aaKnown RBP eCLIP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 RASSF7Q02833 373 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 CHRNDQ07001 517 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 DPP8Q6V1X1 898 aaPredicted RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 ATG9AQ7Z3C6 839 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 RPAP2Q8IXW5 612 aaPredicted RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 DHX37Q8IY37 1157 aaKnown RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 SIL1Q9H173 461 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 ZNF277Q9NRM2 450 aaPredicted RBP8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 TAF1P21675 1872 aa8.98□□□□□ -0.97
CEACAM3-206ENST00000599305 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 SURF6O75683 361 aaKnown RBP8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 TBC1D16Q8TBP0 767 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 GPR101Q96P66 508 aaPredicted RBP8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 PSMD1Q99460 953 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 RTFDC1Q9BY42 306 aaPredicted RBP8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 ANKRD2Q9GZV1 360 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 TAOK3Q9H2K8 898 aa8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
CEACAM3-206ENST00000599305 LAMB2P55268 1798 aa8.96□□□□□ -0.97
CEACAM3-206ENST00000599305 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 CIAO1O76071 339 aa8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 UFL1O94874 794 aa8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 ATP2B4P23634 1241 aa8.96□□□□□ -0.98
CEACAM3-206ENST00000599305 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms