RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 SCNN1DP51172 638 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 KAZALD1Q96I82 304 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 EYA3Q99504 573 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
VRK3-215ENST00000599138 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
VRK3-215ENST00000599138 SCN9AQ15858 1988 aa12.27□□□□□ -0.44
VRK3-215ENST00000599138 UFL1O94874 794 aa12.27□□□□□ -0.45
VRK3-215ENST00000599138 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
VRK3-215ENST00000599138 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
VRK3-215ENST00000599138 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
VRK3-215ENST00000599138 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
VRK3-215ENST00000599138 GJA3Q9Y6H8 435 aa12.27□□□□□ -0.45
VRK3-215ENST00000599138 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 ATP2B4P23634 1241 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 EPHX2P34913 555 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 LMBR1LQ6UX01 489 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
VRK3-215ENST00000599138 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
VRK3-215ENST00000599138 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
VRK3-215ENST00000599138 ZBED9Q6R2W3 1325 aa12.26□□□□□ -0.45
VRK3-215ENST00000599138 WTIPA6NIX2 430 aaPredicted RBP12.25□□□□□ -0.45
VRK3-215ENST00000599138 RAD17O75943 681 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 EPS15P42566 896 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 APLP1P51693 650 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 IFIT5Q13325 482 aaKnown RBP12.25□□□□□ -0.45
VRK3-215ENST00000599138 TNIP1Q15025 636 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
VRK3-215ENST00000599138 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
VRK3-215ENST00000599138 LDHDQ86WU2 507 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 ARHGAP45Q92619 1136 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
VRK3-215ENST00000599138 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
VRK3-215ENST00000599138 ECE2O60344 883 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
VRK3-215ENST00000599138 GMPSP49915 693 aaPredicted RBP12.24□□□□□ -0.45
VRK3-215ENST00000599138 CCT4P50991 539 aaKnown RBP12.24□□□□□ -0.45
VRK3-215ENST00000599138 PSME4Q14997 1843 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
VRK3-215ENST00000599138 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 PSMD14O00487 310 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 CHRNDQ07001 517 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 DPF2Q92785 391 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
VRK3-215ENST00000599138 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
VRK3-215ENST00000599138 ZNF609O15014 1411 aa12.22□□□□□ -0.45
VRK3-215ENST00000599138 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
VRK3-215ENST00000599138 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
VRK3-215ENST00000599138 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
VRK3-215ENST00000599138 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 VIL1P09327 827 aaKnown RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 TXNRD3Q86VQ6 643 aa12.22□□□□□ -0.45
VRK3-215ENST00000599138 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 ADARB2Q9NS39 739 aaKnown RBP12.22□□□□□ -0.45
VRK3-215ENST00000599138 BCAR3O75815 825 aa12.21□□□□□ -0.45
VRK3-215ENST00000599138 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.45
VRK3-215ENST00000599138 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
VRK3-215ENST00000599138 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
VRK3-215ENST00000599138 PODNQ7Z5L7 613 aa12.21□□□□□ -0.45
VRK3-215ENST00000599138 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
VRK3-215ENST00000599138 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
VRK3-215ENST00000599138 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
VRK3-215ENST00000599138 IPO8O15397 1037 aaKnown RBP12.2□□□□□ -0.46
VRK3-215ENST00000599138 KLRK1P26718 216 aa12.2□□□□□ -0.46
VRK3-215ENST00000599138 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
VRK3-215ENST00000599138 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
VRK3-215ENST00000599138 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
VRK3-215ENST00000599138 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
VRK3-215ENST00000599138 ZNF646O15015 1829 aaPredicted RBP12.2□□□□□ -0.46
VRK3-215ENST00000599138 G3V3G9 751 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 SNAP23O00161 211 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 TAF5LO75529 589 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 TRIM27P14373 513 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 HIRAP54198 1017 aaPredicted RBP12.19□□□□□ -0.46
VRK3-215ENST00000599138 HTRA3P83110 453 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
VRK3-215ENST00000599138 ATF7IPQ6VMQ6 1270 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
VRK3-215ENST00000599138 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms