RNA–Protein interactions for RNA: ENST00000597977.5

SYDE1-202, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2

Gene SYDE1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-202ENST00000597977 EPS15P42566 896 aa17.2■□□□□ 0.34
SYDE1-202ENST00000597977 ECE1P42892 770 aa17.2■□□□□ 0.34
SYDE1-202ENST00000597977 CASP7P55210 303 aa17.2■□□□□ 0.34
SYDE1-202ENST00000597977 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
SYDE1-202ENST00000597977 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
SYDE1-202ENST00000597977 PTPRCP08575 1304 aa17.2■□□□□ 0.34
SYDE1-202ENST00000597977 H7C1W4 665 aa17.19■□□□□ 0.34
SYDE1-202ENST00000597977 LMOD1P29536 600 aaPredicted RBP17.19■□□□□ 0.34
SYDE1-202ENST00000597977 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
SYDE1-202ENST00000597977 CST9Q5W186 159 aa17.19■□□□□ 0.34
SYDE1-202ENST00000597977 UBE3BQ7Z3V4 1068 aa17.19■□□□□ 0.34
SYDE1-202ENST00000597977 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
SYDE1-202ENST00000597977 PPEF1O14829 653 aaPredicted RBP17.18■□□□□ 0.34
SYDE1-202ENST00000597977 EIF6P56537 245 aaKnown RBP17.18■□□□□ 0.34
SYDE1-202ENST00000597977 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
SYDE1-202ENST00000597977 SCNN1DP51172 638 aa17.17■□□□□ 0.34
SYDE1-202ENST00000597977 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
SYDE1-202ENST00000597977 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
SYDE1-202ENST00000597977 ABCC4O15439 1325 aa17.17■□□□□ 0.34
SYDE1-202ENST00000597977 CDHR2Q9BYE9 1310 aa17.17■□□□□ 0.34
SYDE1-202ENST00000597977 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
SYDE1-202ENST00000597977 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
SYDE1-202ENST00000597977 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
SYDE1-202ENST00000597977 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
SYDE1-202ENST00000597977 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
SYDE1-202ENST00000597977 SEC31BQ9NQW1 1179 aa17.15■□□□□ 0.34
SYDE1-202ENST00000597977 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
SYDE1-202ENST00000597977 PDE8AO60658 829 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 ALDH1L1O75891 902 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 TRIM27P14373 513 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 CC2D2BQ6DHV5 1058 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
SYDE1-202ENST00000597977 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
SYDE1-202ENST00000597977 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
SYDE1-202ENST00000597977 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
SYDE1-202ENST00000597977 GRM8O00222 908 aa17.13■□□□□ 0.33
SYDE1-202ENST00000597977 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
SYDE1-202ENST00000597977 MAP2K2P36507 400 aa17.13■□□□□ 0.33
SYDE1-202ENST00000597977 DGKZQ13574 1117 aa17.13■□□□□ 0.33
SYDE1-202ENST00000597977 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
SYDE1-202ENST00000597977 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
SYDE1-202ENST00000597977 MYH3P11055 1940 aa17.13■□□□□ 0.33
SYDE1-202ENST00000597977 PSME4Q14997 1843 aa17.12■□□□□ 0.33
SYDE1-202ENST00000597977 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
SYDE1-202ENST00000597977 CTSWP56202 376 aa17.12■□□□□ 0.33
SYDE1-202ENST00000597977 AOC3Q16853 763 aa17.12■□□□□ 0.33
SYDE1-202ENST00000597977 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
SYDE1-202ENST00000597977 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
SYDE1-202ENST00000597977 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
SYDE1-202ENST00000597977 TNRC18O15417 2968 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-202ENST00000597977 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 FOXO4P98177 505 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 GRAPQ13588 217 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
SYDE1-202ENST00000597977 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
SYDE1-202ENST00000597977 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 GREM2Q9H772 168 aa17.11■□□□□ 0.33
SYDE1-202ENST00000597977 RLBP1P12271 317 aa17.1■□□□□ 0.33
SYDE1-202ENST00000597977 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
SYDE1-202ENST00000597977 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
SYDE1-202ENST00000597977 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-202ENST00000597977 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-202ENST00000597977 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
SYDE1-202ENST00000597977 UTYO14607 1347 aa17.1■□□□□ 0.33
SYDE1-202ENST00000597977 CA12O43570 354 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 CASP8AP2Q9UKL3 1982 aa17.09■□□□□ 0.33
SYDE1-202ENST00000597977 ZNF646O15015 1829 aaPredicted RBP17.08■□□□□ 0.33
SYDE1-202ENST00000597977 CSF1RP07333 972 aa17.08■□□□□ 0.32
SYDE1-202ENST00000597977 CCDC152Q4G0S7 254 aa17.08■□□□□ 0.32
SYDE1-202ENST00000597977 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
SYDE1-202ENST00000597977 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
SYDE1-202ENST00000597977 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
SYDE1-202ENST00000597977 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
SYDE1-202ENST00000597977 PLIN1O60240 522 aa17.07■□□□□ 0.32
SYDE1-202ENST00000597977 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
SYDE1-202ENST00000597977 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
SYDE1-202ENST00000597977 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SYDE1-202ENST00000597977 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
SYDE1-202ENST00000597977 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
SYDE1-202ENST00000597977 MEIS3Q99687 375 aa17.07■□□□□ 0.32
SYDE1-202ENST00000597977 RTFDC1Q9BY42 306 aaPredicted RBP17.07■□□□□ 0.32
SYDE1-202ENST00000597977 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
SYDE1-202ENST00000597977 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
SYDE1-202ENST00000597977 BBOX1O75936 387 aa17.06■□□□□ 0.32
SYDE1-202ENST00000597977 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
SYDE1-202ENST00000597977 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
SYDE1-202ENST00000597977 HSP90B1P14625 803 aaKnown RBP17.05■□□□□ 0.32
SYDE1-202ENST00000597977 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
SYDE1-202ENST00000597977 SOX10P56693 466 aa17.05■□□□□ 0.32
SYDE1-202ENST00000597977 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
SYDE1-202ENST00000597977 CXCL9Q07325 125 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms