RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 AOC2O75106 756 aa21.96■■□□□ 1.11
PNKP-210ENST00000597965 KRT26Q7Z3Y9 468 aa21.96■■□□□ 1.11
PNKP-210ENST00000597965 USP48Q86UV5 1035 aa21.96■■□□□ 1.11
PNKP-210ENST00000597965 TBC1D16Q8TBP0 767 aa21.96■■□□□ 1.11
PNKP-210ENST00000597965 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
PNKP-210ENST00000597965 PRKRIP1Q9H875 184 aaPredicted RBP21.96■■□□□ 1.11
PNKP-210ENST00000597965 CCDC30Q5VVM6 783 aa21.95■■□□□ 1.1
PNKP-210ENST00000597965 SAMD7Q7Z3H4 446 aa21.95■■□□□ 1.1
PNKP-210ENST00000597965 C2orf69Q8N8R5 385 aa21.95■■□□□ 1.1
PNKP-210ENST00000597965 APAF1O14727 1248 aa21.94■■□□□ 1.1
PNKP-210ENST00000597965 PDE8AO60658 829 aa21.94■■□□□ 1.1
PNKP-210ENST00000597965 PCCAP05165 728 aaPredicted RBP21.94■■□□□ 1.1
PNKP-210ENST00000597965 HUNKP57058 714 aa21.94■■□□□ 1.1
PNKP-210ENST00000597965 MYD88Q99836 296 aa21.94■■□□□ 1.1
PNKP-210ENST00000597965 CWC25Q9NXE8 425 aaPredicted RBP21.94■■□□□ 1.1
PNKP-210ENST00000597965 GGA1Q9UJY5 639 aa21.94■■□□□ 1.1
PNKP-210ENST00000597965 VIL1P09327 827 aaKnown RBP21.93■■□□□ 1.1
PNKP-210ENST00000597965 DOK7Q18PE1 504 aa21.93■■□□□ 1.1
PNKP-210ENST00000597965 TBC1D10BQ4KMP7 808 aaPredicted RBP21.93■■□□□ 1.1
PNKP-210ENST00000597965 UFL1O94874 794 aa21.92■■□□□ 1.1
PNKP-210ENST00000597965 SULF1Q8IWU6 871 aa21.92■■□□□ 1.1
PNKP-210ENST00000597965 CCDC102AQ96A19 550 aa21.92■■□□□ 1.1
PNKP-210ENST00000597965 PHAXQ9H814 394 aaKnown RBP21.92■■□□□ 1.1
PNKP-210ENST00000597965 SHTN1A0MZ66 631 aa21.91■■□□□ 1.1
PNKP-210ENST00000597965 ELL2O00472 640 aaPredicted RBP21.91■■□□□ 1.1
PNKP-210ENST00000597965 KIF4BQ2VIQ3 1234 aa21.91■■□□□ 1.1
PNKP-210ENST00000597965 ANKRD18AQ8IVF6 992 aa21.91■■□□□ 1.1
PNKP-210ENST00000597965 AGBL3Q8NEM8 1001 aa21.91■■□□□ 1.1
PNKP-210ENST00000597965 METTL22Q9BUU2 404 aaPredicted RBP21.91■■□□□ 1.1
PNKP-210ENST00000597965 GBA2Q9HCG7 927 aaPredicted RBP21.91■■□□□ 1.1
PNKP-210ENST00000597965 RTL9Q8NET4 1388 aa21.9■■□□□ 1.1
PNKP-210ENST00000597965 XDHP47989 1333 aa21.9■■□□□ 1.1
PNKP-210ENST00000597965 RBM26Q5T8P6 1007 aaKnown RBP21.9■■□□□ 1.1
PNKP-210ENST00000597965 RGMBQ6NW40 437 aa21.9■■□□□ 1.1
PNKP-210ENST00000597965 ZNF609O15014 1411 aa21.89■■□□□ 1.1
PNKP-210ENST00000597965 NEXNQ0ZGT2 675 aa21.89■■□□□ 1.09
PNKP-210ENST00000597965 CDC5LQ99459 802 aaKnown RBP21.89■■□□□ 1.09
PNKP-210ENST00000597965 SEC31BQ9NQW1 1179 aa21.89■■□□□ 1.09
PNKP-210ENST00000597965 CCDC85CA6NKD9 419 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 ATP2B4P23634 1241 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 PODNQ7Z5L7 613 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 KCNQ5Q9NR82 932 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 TSKSQ9UJT2 592 aa21.88■■□□□ 1.09
PNKP-210ENST00000597965 POLR2AP24928 1970 aaKnown RBP21.88■■□□□ 1.09
PNKP-210ENST00000597965 RSBN1LQ6PCB5 846 aaPredicted RBP21.87■■□□□ 1.09
PNKP-210ENST00000597965 SAGE1Q9NXZ1 904 aa21.87■■□□□ 1.09
PNKP-210ENST00000597965 EGFRP00533 1210 aa21.86■■□□□ 1.09
PNKP-210ENST00000597965 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
PNKP-210ENST00000597965 ZNF157P51786 506 aaPredicted RBP21.86■■□□□ 1.09
PNKP-210ENST00000597965 KSR2Q6VAB6 950 aa21.86■■□□□ 1.09
PNKP-210ENST00000597965 REM2Q8IYK8 340 aaPredicted RBP21.86■■□□□ 1.09
PNKP-210ENST00000597965 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
PNKP-210ENST00000597965 GGA3Q9NZ52 723 aa21.86■■□□□ 1.09
PNKP-210ENST00000597965 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
PNKP-210ENST00000597965 ZNF280AP59817 542 aaPredicted RBP21.85■■□□□ 1.09
PNKP-210ENST00000597965 ADM5C9JUS6 153 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 USP17L8P0C7I0 530 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 CTSWP56202 376 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 FKBP1BP68106 108 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 SCN9AQ15858 1988 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 COL4A1P02462 1669 aa21.84■■□□□ 1.09
PNKP-210ENST00000597965 USP17L3A6NCW0 530 aa21.83■■□□□ 1.09
PNKP-210ENST00000597965 USP17L4A6NCW7 530 aa21.83■■□□□ 1.09
PNKP-210ENST00000597965 MMP14P50281 582 aa21.83■■□□□ 1.09
PNKP-210ENST00000597965 MLLT1Q03111 559 aaPredicted RBP21.83■■□□□ 1.09
PNKP-210ENST00000597965 USP17L1Q7RTZ2 530 aa21.83■■□□□ 1.09
PNKP-210ENST00000597965 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
PNKP-210ENST00000597965 BSDC1Q9NW68 430 aaPredicted RBP21.83■■□□□ 1.09
PNKP-210ENST00000597965 CASP8AP2Q9UKL3 1982 aa21.83■■□□□ 1.08
PNKP-210ENST00000597965 PSME4Q14997 1843 aa21.83■■□□□ 1.08
PNKP-210ENST00000597965 PITPNM2Q9BZ72 1349 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 PI4KAP2A4QPH2 592 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 FAM155AB1AL88 458 aaPredicted RBP21.82■■□□□ 1.08
PNKP-210ENST00000597965 SCARF1Q14162 830 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 OGFOD1Q8N543 542 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 PI4KAP1Q8N8J0 262 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 CCDC85AQ96PX6 553 aaPredicted RBP21.82■■□□□ 1.08
PNKP-210ENST00000597965 MYOZ2Q9NPC6 264 aa21.82■■□□□ 1.08
PNKP-210ENST00000597965 MYH3P11055 1940 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 RGS19P49795 217 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 DGKZQ13574 1117 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 CCDC27Q2M243 656 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 ANGEL2Q5VTE6 544 aaKnown RBP21.81■■□□□ 1.08
PNKP-210ENST00000597965 CDCA5Q96FF9 252 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 MED23Q9ULK4 1368 aa21.81■■□□□ 1.08
PNKP-210ENST00000597965 MYO3BQ8WXR4 1341 aa21.8■■□□□ 1.08
PNKP-210ENST00000597965 KIF23Q02241 960 aaPredicted RBP21.8■■□□□ 1.08
PNKP-210ENST00000597965 TTLL11Q8NHH1 800 aa21.8■■□□□ 1.08
PNKP-210ENST00000597965 AKAP11Q9UKA4 1901 aa21.79■■□□□ 1.08
PNKP-210ENST00000597965 SLC10A3P09131 477 aa21.79■■□□□ 1.08
PNKP-210ENST00000597965 DLK2Q6UY11 383 aa21.79■■□□□ 1.08
PNKP-210ENST00000597965 JARID2Q92833 1246 aaPredicted RBP21.79■■□□□ 1.08
PNKP-210ENST00000597965 GMLQ99445 158 aa21.79■■□□□ 1.08
PNKP-210ENST00000597965 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
PNKP-210ENST00000597965 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
PNKP-210ENST00000597965 ZIC5Q96T25 663 aa21.78■■□□□ 1.08
PNKP-210ENST00000597965 MINPP1Q9UNW1 487 aa21.78■■□□□ 1.08
PNKP-210ENST00000597965 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms