RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 PDCL3Q9H2J4 239 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 ORC3Q9UBD5 711 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-207ENST00000597928 ADAMTS13Q76LX8 1427 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 AOPEPQ8N6M6 819 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 TTC14Q96N46 770 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 CFAP45Q9UL16 551 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 OVOS2A0A0J9YW53 1432 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 OVOS2Q6IE36 1432 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 TAF5LO75529 589 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 ADORA1P30542 326 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 FAM200AQ8TCP9 573 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-207ENST00000597928 PLEKHG1Q9ULL1 1385 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 CDK11BP21127 795 aaKnown RBP14.54□□□□□ -0.08
USHBP1-207ENST00000597928 KRT32Q14532 448 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 MAP4K1Q92918 833 aa14.54□□□□□ -0.08
USHBP1-207ENST00000597928 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
USHBP1-207ENST00000597928 JAG2Q9Y219 1238 aa14.53□□□□□ -0.08
USHBP1-207ENST00000597928 MINDY4BA8MYZ0 360 aa14.53□□□□□ -0.08
USHBP1-207ENST00000597928 TRIM29Q14134 588 aa14.53□□□□□ -0.08
USHBP1-207ENST00000597928 NAA30Q147X3 362 aaPredicted RBP14.53□□□□□ -0.08
USHBP1-207ENST00000597928 KIF6Q6ZMV9 814 aa14.53□□□□□ -0.08
USHBP1-207ENST00000597928 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
USHBP1-207ENST00000597928 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
USHBP1-207ENST00000597928 LMOD1P29536 600 aaPredicted RBP14.52□□□□□ -0.08
USHBP1-207ENST00000597928 IFIT5Q13325 482 aaKnown RBP14.52□□□□□ -0.08
USHBP1-207ENST00000597928 INCENPQ9NQS7 918 aa14.52□□□□□ -0.08
USHBP1-207ENST00000597928 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.08
USHBP1-207ENST00000597928 RPAP1Q9BWH6 1393 aaPredicted RBP14.52□□□□□ -0.08
USHBP1-207ENST00000597928 RIMS1Q86UR5 1692 aaKnown RBP14.52□□□□□ -0.08
USHBP1-207ENST00000597928 SCRN1Q12765 414 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 IMMTQ16891 758 aaKnown RBP14.52□□□□□ -0.09
USHBP1-207ENST00000597928 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
USHBP1-207ENST00000597928 PHKG2P15735 406 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.09
USHBP1-207ENST00000597928 PDCL2Q8N4E4 241 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 PHKBQ93100 1093 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 ACSBG1Q96GR2 724 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 USP28Q96RU2 1077 aa14.52□□□□□ -0.09
USHBP1-207ENST00000597928 SALL3Q9BXA9 1300 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 ZNF213O14771 459 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 SERPINC1P01008 464 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 CCDC24Q8N4L8 307 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 RASSF8Q8NHQ8 419 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 ZNF396Q96N95 335 aaPredicted RBP14.51□□□□□ -0.09
USHBP1-207ENST00000597928 NUTM2BA6NNL0 878 aaPredicted RBP14.51□□□□□ -0.09
USHBP1-207ENST00000597928 NUTM2EB1AL46 878 aaPredicted RBP14.51□□□□□ -0.09
USHBP1-207ENST00000597928 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 NUTM2AQ8IVF1 878 aaPredicted RBP14.51□□□□□ -0.09
USHBP1-207ENST00000597928 CCDC112Q8NEF3 446 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
USHBP1-207ENST00000597928 NRDCO43847 1150 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
USHBP1-207ENST00000597928 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 ZNF771Q7L3S4 317 aaPredicted RBP14.5□□□□□ -0.09
USHBP1-207ENST00000597928 ZCRB1Q8TBF4 217 aaKnown RBP14.5□□□□□ -0.09
USHBP1-207ENST00000597928 AIFM3Q96NN9 605 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 ZAP70P43403 619 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 TMC6Q7Z403 805 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 IFT172Q9UG01 1749 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 KDRP35968 1356 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 CYP27B1O15528 508 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 AP5Z1O43299 807 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 PRC1O43663 620 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 MIGA1Q8NAN2 632 aa14.5□□□□□ -0.09
USHBP1-207ENST00000597928 CLEC17AQ6ZS10 378 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
USHBP1-207ENST00000597928 CDC42BPGQ6DT37 1551 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 CPLX2Q6PUV4 134 aaKnown RBP14.49□□□□□ -0.09
USHBP1-207ENST00000597928 DLC1Q96QB1 1528 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 U2AF2P26368 475 aaKnown RBP eCLIP14.49□□□□□ -0.09
USHBP1-207ENST00000597928 DNAJC10Q8IXB1 793 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 DDX19AQ9NUU7 478 aaKnown RBP14.49□□□□□ -0.09
USHBP1-207ENST00000597928 MRVI1Q9Y6F6 885 aa14.49□□□□□ -0.09
USHBP1-207ENST00000597928 USP31Q70CQ4 1352 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 TDO2P48775 406 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 TPM4P67936 248 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 HMGN5P82970 282 aaKnown RBP14.48□□□□□ -0.09
USHBP1-207ENST00000597928 CEP57L1Q8IYX8 460 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 CPLX3Q8WVH0 158 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 PDLIM2Q96JY6 352 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 AOX1Q06278 1338 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 E7EWF7 191 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 SKILP12757 684 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 GOLGA8FQ08AF8 430 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 GOLGA8DPQ0D2H9 430 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 ZNF500O60304 480 aaPredicted RBP14.48□□□□□ -0.09
USHBP1-207ENST00000597928 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
USHBP1-207ENST00000597928 CFAP100Q494V2 611 aa14.48□□□□□ -0.09
USHBP1-207ENST00000597928 B4E1Z4 1266 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 ADD1P35611 737 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms