RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
SSBP4-204ENST00000597724 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
SSBP4-204ENST00000597724 GPC2Q8N158 579 aa21.1■□□□□ 0.97
SSBP4-204ENST00000597724 ZNRF3Q9ULT6 936 aa21.1■□□□□ 0.97
SSBP4-204ENST00000597724 XDHP47989 1333 aa21.09■□□□□ 0.97
SSBP4-204ENST00000597724 IFIT5Q13325 482 aaKnown RBP21.09■□□□□ 0.97
SSBP4-204ENST00000597724 EYA3Q99504 573 aa21.09■□□□□ 0.97
SSBP4-204ENST00000597724 GGA1Q9UJY5 639 aa21.09■□□□□ 0.97
SSBP4-204ENST00000597724 CHMP3Q9Y3E7 222 aa21.09■□□□□ 0.97
SSBP4-204ENST00000597724 SPEF2Q9C093 1822 aa21.08■□□□□ 0.97
SSBP4-204ENST00000597724 RIMBP2O15034 1052 aa21.08■□□□□ 0.97
SSBP4-204ENST00000597724 IPO8O15397 1037 aaKnown RBP21.08■□□□□ 0.97
SSBP4-204ENST00000597724 UFL1O94874 794 aa21.08■□□□□ 0.97
SSBP4-204ENST00000597724 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
SSBP4-204ENST00000597724 CCDC57Q2TAC2 916 aa21.07■□□□□ 0.96
SSBP4-204ENST00000597724 RBM46Q8TBY0 533 aaKnown RBP21.07■□□□□ 0.96
SSBP4-204ENST00000597724 GPR101Q96P66 508 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-204ENST00000597724 ZC3H12CQ9C0D7 883 aaKnown RBP21.07■□□□□ 0.96
SSBP4-204ENST00000597724 BICC1Q9H694 974 aaKnown RBP21.07■□□□□ 0.96
SSBP4-204ENST00000597724 IQCA1LA6NCM1 817 aa21.06■□□□□ 0.96
SSBP4-204ENST00000597724 ATP2B4P23634 1241 aa21.06■□□□□ 0.96
SSBP4-204ENST00000597724 CXCL9Q07325 125 aa21.06■□□□□ 0.96
SSBP4-204ENST00000597724 RABL6Q3YEC7 729 aaPredicted RBP21.06■□□□□ 0.96
SSBP4-204ENST00000597724 FRAT1Q92837 279 aaPredicted RBP21.06■□□□□ 0.96
SSBP4-204ENST00000597724 GJA3Q9Y6H8 435 aa21.06■□□□□ 0.96
SSBP4-204ENST00000597724 WTIPA6NIX2 430 aaPredicted RBP21.05■□□□□ 0.96
SSBP4-204ENST00000597724 TRIM27P14373 513 aa21.05■□□□□ 0.96
SSBP4-204ENST00000597724 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
SSBP4-204ENST00000597724 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
SSBP4-204ENST00000597724 SCN4AP35499 1836 aa21.05■□□□□ 0.96
SSBP4-204ENST00000597724 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
SSBP4-204ENST00000597724 CIAPIN1Q6FI81 312 aa21.04■□□□□ 0.96
SSBP4-204ENST00000597724 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
SSBP4-204ENST00000597724 ZNF594Q96JF6 807 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-204ENST00000597724 ANKRD2Q9GZV1 360 aa21.04■□□□□ 0.96
SSBP4-204ENST00000597724 DBNDD1Q9H9R9 158 aa21.04■□□□□ 0.96
SSBP4-204ENST00000597724 RAD17O75943 681 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 CHRNDQ07001 517 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 DOK7Q18PE1 504 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 TAF1DQ9H5J8 278 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-204ENST00000597724 HACL1Q9UJ83 578 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 TNNQ9UQP3 1299 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 LEMD3Q9Y2U8 911 aa21.03■□□□□ 0.96
SSBP4-204ENST00000597724 ECE2O60344 883 aa21.02■□□□□ 0.96
SSBP4-204ENST00000597724 TNIP1Q15025 636 aa21.02■□□□□ 0.96
SSBP4-204ENST00000597724 TAF7LQ5H9L4 462 aa21.02■□□□□ 0.96
SSBP4-204ENST00000597724 LDHAL6AQ6ZMR3 332 aa21.02■□□□□ 0.96
SSBP4-204ENST00000597724 UBTFL1P0CB47 393 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-204ENST00000597724 SCNN1DP51172 638 aa21.01■□□□□ 0.95
SSBP4-204ENST00000597724 FSTL1Q12841 308 aa21.01■□□□□ 0.95
SSBP4-204ENST00000597724 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
SSBP4-204ENST00000597724 MED23Q9ULK4 1368 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 EPHX2P34913 555 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 SMC1BQ8NDV3 1235 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 CLUAP1Q96AJ1 413 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 KCNQ5Q9NR82 932 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 ZNF804BA4D1E1 1349 aa21■□□□□ 0.95
SSBP4-204ENST00000597724 G3V3G9 751 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 POTEIP0CG38 1075 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 POTEJP0CG39 1038 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 DCAF8Q5TAQ9 597 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 HELBQ8NG08 1087 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-204ENST00000597724 MEIS3Q99687 375 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
SSBP4-204ENST00000597724 PSMD14O00487 310 aa20.98■□□□□ 0.95
SSBP4-204ENST00000597724 TAF5LO75529 589 aa20.98■□□□□ 0.95
SSBP4-204ENST00000597724 LMOD1P29536 600 aaPredicted RBP20.98■□□□□ 0.95
SSBP4-204ENST00000597724 EPS15P42566 896 aa20.98■□□□□ 0.95
SSBP4-204ENST00000597724 GMPSP49915 693 aaPredicted RBP20.98■□□□□ 0.95
SSBP4-204ENST00000597724 PUS3Q9BZE2 481 aaKnown RBP20.98■□□□□ 0.95
SSBP4-204ENST00000597724 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
SSBP4-204ENST00000597724 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
SSBP4-204ENST00000597724 HSPA6P17066 643 aa20.97■□□□□ 0.95
SSBP4-204ENST00000597724 PODNQ7Z5L7 613 aa20.97■□□□□ 0.95
SSBP4-204ENST00000597724 PNMA8AQ86V59 439 aaPredicted RBP20.97■□□□□ 0.95
SSBP4-204ENST00000597724 TXNRD3Q86VQ6 643 aa20.97■□□□□ 0.95
SSBP4-204ENST00000597724 GPRC5DQ9NZD1 345 aa20.97■□□□□ 0.95
SSBP4-204ENST00000597724 SCN9AQ15858 1988 aa20.96■□□□□ 0.95
SSBP4-204ENST00000597724 SNAP23O00161 211 aa20.96■□□□□ 0.95
SSBP4-204ENST00000597724 GNAI3P08754 354 aa20.96■□□□□ 0.95
SSBP4-204ENST00000597724 KCNJ4P48050 445 aa20.96■□□□□ 0.95
SSBP4-204ENST00000597724 RIPOR2Q9Y4F9 1068 aa20.96■□□□□ 0.95
SSBP4-204ENST00000597724 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
SSBP4-204ENST00000597724 A0A1B0GUL6 1792 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 KLRK1P26718 216 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 EAPPQ56P03 285 aaPredicted RBP20.95■□□□□ 0.94
SSBP4-204ENST00000597724 CHADLQ6NUI6 762 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 LDHDQ86WU2 507 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 TMEM57Q8N5G2 664 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 DPF2Q92785 391 aa20.95■□□□□ 0.94
SSBP4-204ENST00000597724 ZBTB12Q9Y330 459 aaPredicted RBP20.95■□□□□ 0.94
SSBP4-204ENST00000597724 PLIN1O60240 522 aa20.94■□□□□ 0.94
SSBP4-204ENST00000597724 VIL1P09327 827 aaKnown RBP20.94■□□□□ 0.94
SSBP4-204ENST00000597724 RFX5P48382 616 aaPredicted RBP20.94■□□□□ 0.94
SSBP4-204ENST00000597724 C15orf52Q6ZUT6 534 aaKnown RBP20.94■□□□□ 0.94
SSBP4-204ENST00000597724 COA1Q9GZY4 146 aa20.94■□□□□ 0.94
SSBP4-204ENST00000597724 IRS2Q9Y4H2 1338 aa20.94■□□□□ 0.94
SSBP4-204ENST00000597724 RPS12P25398 132 aaKnown RBP20.93■□□□□ 0.94
SSBP4-204ENST00000597724 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
SSBP4-204ENST00000597724 USP50Q70EL3 339 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms