RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 DOK7Q18PE1 504 aa17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
SOX2-OT-227ENST00000597651 PDE8AO60658 829 aa17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
SOX2-OT-227ENST00000597651 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
SOX2-OT-227ENST00000597651 WBP1LQ9NX94 342 aa17.44■□□□□ 0.38
SOX2-OT-227ENST00000597651 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
SOX2-OT-227ENST00000597651 SPEF2Q9C093 1822 aa17.44■□□□□ 0.38
SOX2-OT-227ENST00000597651 MYH3P11055 1940 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 POLR2AP24928 1970 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 ECE2O60344 883 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 TNIP1Q15025 636 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-227ENST00000597651 PSME4Q14997 1843 aa17.42■□□□□ 0.38
SOX2-OT-227ENST00000597651 NEURL1BA8MQ27 555 aa17.42■□□□□ 0.38
SOX2-OT-227ENST00000597651 TTLL11Q8NHH1 800 aa17.42■□□□□ 0.38
SOX2-OT-227ENST00000597651 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
SOX2-OT-227ENST00000597651 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 CASP7P55210 303 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 CTSWP56202 376 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 FLIIQ13045 1269 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 CYP4F22Q6NT55 531 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 DPF2Q92785 391 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 GREM2Q9H772 168 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
SOX2-OT-227ENST00000597651 H7C1W4 665 aa17.4■□□□□ 0.38
SOX2-OT-227ENST00000597651 UFL1O94874 794 aa17.4■□□□□ 0.38
SOX2-OT-227ENST00000597651 VIL1P09327 827 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 TBC1D10BQ4KMP7 808 aaPredicted RBP17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 SAPCD2Q86UD0 394 aa17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
SOX2-OT-227ENST00000597651 CELF2O95319 508 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-227ENST00000597651 EYA3Q99504 573 aa17.38■□□□□ 0.37
SOX2-OT-227ENST00000597651 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
SOX2-OT-227ENST00000597651 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
SOX2-OT-227ENST00000597651 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
SOX2-OT-227ENST00000597651 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 H7C1D1 291 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 AOC2O75106 756 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 CAPN15O75808 1086 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 GCKRQ14397 625 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZC3H12CQ9C0D7 883 aaKnown RBP17.37■□□□□ 0.37
SOX2-OT-227ENST00000597651 HSPA8P11142 646 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 LBX1P52954 281 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 GMLQ99445 158 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 PRDM10Q9NQV6 1147 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 XDHP47989 1333 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZNF609O15014 1411 aa17.36■□□□□ 0.37
SOX2-OT-227ENST00000597651 HSP90B1P14625 803 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
SOX2-OT-227ENST00000597651 ADM5C9JUS6 153 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 F6X3S4 739 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 CSF1RP07333 972 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 KLRK1P26718 216 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 GRM1Q13255 1194 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZNF408Q9H9D4 720 aa17.34■□□□□ 0.37
SOX2-OT-227ENST00000597651 A0A1B0GUL6 1792 aa17.33■□□□□ 0.37
SOX2-OT-227ENST00000597651 ZNF280AP59817 542 aaPredicted RBP17.33■□□□□ 0.36
SOX2-OT-227ENST00000597651 FAM161AQ3B820 660 aa17.33■□□□□ 0.36
SOX2-OT-227ENST00000597651 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.36
SOX2-OT-227ENST00000597651 CDC5LQ99459 802 aaKnown RBP17.33■□□□□ 0.36
SOX2-OT-227ENST00000597651 MXD3Q9BW11 206 aa17.33■□□□□ 0.36
SOX2-OT-227ENST00000597651 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms