RNA–Protein interactions for RNA: ENST00000596822.5

IRF3-215, Transcript of interferon regulatory factor 3, humanhuman

TSL 3 BASIC

Gene IRF3, Length 823 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-215ENST00000596822 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
IRF3-215ENST00000596822 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
IRF3-215ENST00000596822 SLC4A10Q6U841 1118 aa18.19■□□□□ 0.5
IRF3-215ENST00000596822 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
IRF3-215ENST00000596822 KLRG1Q96E93 195 aa18.19■□□□□ 0.5
IRF3-215ENST00000596822 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
IRF3-215ENST00000596822 ECE2O60344 883 aa18.18■□□□□ 0.5
IRF3-215ENST00000596822 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
IRF3-215ENST00000596822 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
IRF3-215ENST00000596822 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
IRF3-215ENST00000596822 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
IRF3-215ENST00000596822 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
IRF3-215ENST00000596822 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
IRF3-215ENST00000596822 DOK7Q18PE1 504 aa18.17■□□□□ 0.5
IRF3-215ENST00000596822 BEND3Q5T5X7 828 aa18.17■□□□□ 0.5
IRF3-215ENST00000596822 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
IRF3-215ENST00000596822 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
IRF3-215ENST00000596822 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
IRF3-215ENST00000596822 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
IRF3-215ENST00000596822 YDJCA8MPS7 323 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 ITGA6P23229 1130 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
IRF3-215ENST00000596822 PSMD14O00487 310 aa18.15■□□□□ 0.5
IRF3-215ENST00000596822 CASP7P55210 303 aa18.15■□□□□ 0.5
IRF3-215ENST00000596822 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
IRF3-215ENST00000596822 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
IRF3-215ENST00000596822 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
IRF3-215ENST00000596822 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
IRF3-215ENST00000596822 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
IRF3-215ENST00000596822 H7C1D1 291 aa18.14■□□□□ 0.49
IRF3-215ENST00000596822 GRM8O00222 908 aa18.14■□□□□ 0.49
IRF3-215ENST00000596822 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
IRF3-215ENST00000596822 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
IRF3-215ENST00000596822 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
IRF3-215ENST00000596822 CSF1RP07333 972 aa18.13■□□□□ 0.49
IRF3-215ENST00000596822 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
IRF3-215ENST00000596822 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
IRF3-215ENST00000596822 CNOT7Q9UIV1 285 aaKnown RBP18.13■□□□□ 0.49
IRF3-215ENST00000596822 PTPRCP08575 1304 aa18.13■□□□□ 0.49
IRF3-215ENST00000596822 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
IRF3-215ENST00000596822 RPS12P25398 132 aaKnown RBP18.12■□□□□ 0.49
IRF3-215ENST00000596822 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
IRF3-215ENST00000596822 IFIT5Q13325 482 aaKnown RBP18.12■□□□□ 0.49
IRF3-215ENST00000596822 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
IRF3-215ENST00000596822 MICALL2Q8IY33 904 aa18.12■□□□□ 0.49
IRF3-215ENST00000596822 ANKRD2Q9GZV1 360 aa18.12■□□□□ 0.49
IRF3-215ENST00000596822 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
IRF3-215ENST00000596822 KCNJ4P48050 445 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 DPF2Q92785 391 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 MED23Q9ULK4 1368 aa18.11■□□□□ 0.49
IRF3-215ENST00000596822 FOXO4P98177 505 aa18.1■□□□□ 0.49
IRF3-215ENST00000596822 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
IRF3-215ENST00000596822 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
IRF3-215ENST00000596822 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
IRF3-215ENST00000596822 MKRN1Q9UHC7 482 aaKnown RBP18.1■□□□□ 0.49
IRF3-215ENST00000596822 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
IRF3-215ENST00000596822 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
IRF3-215ENST00000596822 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
IRF3-215ENST00000596822 ZNF804BA4D1E1 1349 aa18.08■□□□□ 0.49
IRF3-215ENST00000596822 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
IRF3-215ENST00000596822 PODNQ7Z5L7 613 aa18.08■□□□□ 0.48
IRF3-215ENST00000596822 TRPM4Q8TD43 1214 aa18.08■□□□□ 0.48
IRF3-215ENST00000596822 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
IRF3-215ENST00000596822 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
IRF3-215ENST00000596822 CHRNDQ07001 517 aa18.07■□□□□ 0.48
IRF3-215ENST00000596822 TBC1D10BQ4KMP7 808 aaPredicted RBP18.07■□□□□ 0.48
IRF3-215ENST00000596822 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
IRF3-215ENST00000596822 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
IRF3-215ENST00000596822 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
IRF3-215ENST00000596822 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
IRF3-215ENST00000596822 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
IRF3-215ENST00000596822 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
IRF3-215ENST00000596822 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 SAMD7Q7Z3H4 446 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 MIER1Q8N108 512 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 CNNM1Q9NRU3 951 aa18.06■□□□□ 0.48
IRF3-215ENST00000596822 CNTNAP1P78357 1384 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
IRF3-215ENST00000596822 TRAF5O00463 557 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 HIRAP54198 1017 aaPredicted RBP18.05■□□□□ 0.48
IRF3-215ENST00000596822 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
IRF3-215ENST00000596822 NBPF7P0C2Y1 421 aaPredicted RBP18.04■□□□□ 0.48
IRF3-215ENST00000596822 KIF4BQ2VIQ3 1234 aa18.04■□□□□ 0.48
IRF3-215ENST00000596822 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
IRF3-215ENST00000596822 ZNF594Q96JF6 807 aaPredicted RBP18.04■□□□□ 0.48
IRF3-215ENST00000596822 GLIS2Q9BZE0 524 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms