RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
VRK3-211ENST00000596445 PSMD1Q99460 953 aa10.42□□□□□ -0.74
VRK3-211ENST00000596445 CNNM1Q9NRU3 951 aa10.42□□□□□ -0.74
VRK3-211ENST00000596445 MINPP1Q9UNW1 487 aa10.42□□□□□ -0.74
VRK3-211ENST00000596445 A0A1B0GUL6 1792 aa10.42□□□□□ -0.74
VRK3-211ENST00000596445 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
VRK3-211ENST00000596445 PNMA6EA0A0J9YXQ4 647 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 GPSM2P81274 684 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
VRK3-211ENST00000596445 AAMPQ13685 434 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 CEP85Q6P2H3 762 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 DPP8Q6V1X1 898 aaPredicted RBP10.41□□□□□ -0.74
VRK3-211ENST00000596445 RPAP2Q8IXW5 612 aaPredicted RBP10.41□□□□□ -0.74
VRK3-211ENST00000596445 KLHDC4Q8TBB5 520 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 SSH3Q8TE77 659 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 RTFDC1Q9BY42 306 aaPredicted RBP10.41□□□□□ -0.74
VRK3-211ENST00000596445 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 COPRSQ9NQ92 184 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
VRK3-211ENST00000596445 RIPOR2Q9Y4F9 1068 aa10.41□□□□□ -0.74
VRK3-211ENST00000596445 DUOX1Q9NRD9 1551 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 XDHP47989 1333 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 EYA2O00167 538 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 LMNB1P20700 586 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 RASSF7Q02833 373 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 CHRNDQ07001 517 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 POLA2Q14181 598 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 LRRC24Q50LG9 513 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 SUPT20HQ8NEM7 779 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 PUS3Q9BZE2 481 aaKnown RBP10.4□□□□□ -0.74
VRK3-211ENST00000596445 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
VRK3-211ENST00000596445 MROH5Q6ZUA9 1318 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 HMMRO75330 724 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 CIAO1O76071 339 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 ATG9AQ7Z3C6 839 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 SIL1Q9H173 461 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 VPS33BQ9H267 617 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
VRK3-211ENST00000596445 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
VRK3-211ENST00000596445 PA2G4Q9UQ80 394 aaKnown RBP10.39□□□□□ -0.75
VRK3-211ENST00000596445 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 UFL1O94874 794 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 ATP2B4P23634 1241 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 IL15P40933 162 aaPredicted RBP10.38□□□□□ -0.75
VRK3-211ENST00000596445 PRELPP51888 382 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 METTL24Q5JXM2 366 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 HELBQ8NG08 1087 aaPredicted RBP10.38□□□□□ -0.75
VRK3-211ENST00000596445 EXOC6Q8TAG9 804 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
VRK3-211ENST00000596445 ZNF804BA4D1E1 1349 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 TAF5LO75529 589 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
VRK3-211ENST00000596445 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
VRK3-211ENST00000596445 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 VGLL2Q8N8G2 317 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 EYA3Q99504 573 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 RNF181Q9P0P0 153 aa10.37□□□□□ -0.75
VRK3-211ENST00000596445 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
VRK3-211ENST00000596445 TIAM2Q8IVF5 1701 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 WTIPA6NIX2 430 aaPredicted RBP10.36□□□□□ -0.75
VRK3-211ENST00000596445 PPIP5K2O43314 1243 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 SURF6O75683 361 aaKnown RBP10.36□□□□□ -0.75
VRK3-211ENST00000596445 PDE8BO95263 885 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 KCNJ4P48050 445 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
VRK3-211ENST00000596445 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 UBE4AQ14139 1066 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 AOC3Q16853 763 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 ZC3H12CQ9C0D7 883 aaKnown RBP10.36□□□□□ -0.75
VRK3-211ENST00000596445 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 PCDHB15Q9Y5E8 787 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 MED23Q9ULK4 1368 aa10.36□□□□□ -0.75
VRK3-211ENST00000596445 COL4A5P29400 1685 aa10.35□□□□□ -0.75
VRK3-211ENST00000596445 SNAP23O00161 211 aa10.35□□□□□ -0.75
VRK3-211ENST00000596445 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
VRK3-211ENST00000596445 PUM3Q15397 648 aaKnown RBP10.35□□□□□ -0.75
VRK3-211ENST00000596445 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
VRK3-211ENST00000596445 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
VRK3-211ENST00000596445 GPR101Q96P66 508 aaPredicted RBP10.35□□□□□ -0.75
VRK3-211ENST00000596445 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
VRK3-211ENST00000596445 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 SASH1O94885 1247 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 FGFR2P21802 821 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 TFCP2Q12800 502 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 NIM1KQ8IY84 436 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 LPIN2Q92539 896 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
VRK3-211ENST00000596445 IRS2Q9Y4H2 1338 aa10.33□□□□□ -0.76
VRK3-211ENST00000596445 G3V3G9 751 aa10.33□□□□□ -0.76
VRK3-211ENST00000596445 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
VRK3-211ENST00000596445 IFIT1P09914 478 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms