RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 KIF16BQ96L93 1317 aa14.07□□□□□ -0.16
VRK3-210ENST00000596121 ANKRD18BA2A2Z9 1011 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 IFIT5Q13325 482 aaKnown RBP14.06□□□□□ -0.16
VRK3-210ENST00000596121 WASHC4Q2M389 1173 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 MEIS3Q99687 375 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 KCNQ5Q9NR82 932 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
VRK3-210ENST00000596121 SNAP23O00161 211 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 UFL1O94874 794 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 RLBP1P12271 317 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 IGHMBP2P38935 993 aaKnown RBP14.05□□□□□ -0.16
VRK3-210ENST00000596121 C1QTNF8P60827 252 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 CXCL9Q07325 125 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 NIM1KQ8IY84 436 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
VRK3-210ENST00000596121 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
VRK3-210ENST00000596121 GGA1Q9UJY5 639 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 XDHP47989 1333 aa14.05□□□□□ -0.16
VRK3-210ENST00000596121 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
VRK3-210ENST00000596121 KLRK1P26718 216 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 TXNRD3Q86VQ6 643 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
VRK3-210ENST00000596121 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
VRK3-210ENST00000596121 TAF5LO75529 589 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 RAD17O75943 681 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
VRK3-210ENST00000596121 ATP2B4P23634 1241 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 RFX5P48382 616 aaPredicted RBP14.03□□□□□ -0.16
VRK3-210ENST00000596121 EIF6P56537 245 aaKnown RBP14.03□□□□□ -0.16
VRK3-210ENST00000596121 CHRNDQ07001 517 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 GPC2Q8N158 579 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 TMEM57Q8N5G2 664 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 MPHOSPH8Q99549 860 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 GJA3Q9Y6H8 435 aa14.03□□□□□ -0.16
VRK3-210ENST00000596121 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.17
VRK3-210ENST00000596121 ECE2O60344 883 aa14.02□□□□□ -0.17
VRK3-210ENST00000596121 TOMM70O94826 608 aa14.02□□□□□ -0.17
VRK3-210ENST00000596121 UBTFL1P0CB47 393 aaPredicted RBP14.02□□□□□ -0.17
VRK3-210ENST00000596121 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
VRK3-210ENST00000596121 POTEJP0CG39 1038 aa14.02□□□□□ -0.17
VRK3-210ENST00000596121 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.17
VRK3-210ENST00000596121 LRRFIP2Q9Y608 721 aaKnown RBP14.02□□□□□ -0.17
VRK3-210ENST00000596121 SCNN1DP51172 638 aa14.01□□□□□ -0.17
VRK3-210ENST00000596121 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
VRK3-210ENST00000596121 LDHAL6AQ6ZMR3 332 aa14.01□□□□□ -0.17
VRK3-210ENST00000596121 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
VRK3-210ENST00000596121 EYA3Q99504 573 aa14.01□□□□□ -0.17
VRK3-210ENST00000596121 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
VRK3-210ENST00000596121 RIPOR2Q9Y4F9 1068 aa14.01□□□□□ -0.17
VRK3-210ENST00000596121 ZNF804BA4D1E1 1349 aa14□□□□□ -0.17
VRK3-210ENST00000596121 SHTN1A0MZ66 631 aa14□□□□□ -0.17
VRK3-210ENST00000596121 EPS15P42566 896 aa14□□□□□ -0.17
VRK3-210ENST00000596121 CIAPIN1Q6FI81 312 aa14□□□□□ -0.17
VRK3-210ENST00000596121 ANKRD2Q9GZV1 360 aa14□□□□□ -0.17
VRK3-210ENST00000596121 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
VRK3-210ENST00000596121 SCN9AQ15858 1988 aa14□□□□□ -0.17
VRK3-210ENST00000596121 PSMD14O00487 310 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 PLIN1O60240 522 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 GMPSP49915 693 aaPredicted RBP13.99□□□□□ -0.17
VRK3-210ENST00000596121 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
VRK3-210ENST00000596121 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 RBM46Q8TBY0 533 aaKnown RBP13.99□□□□□ -0.17
VRK3-210ENST00000596121 PANK1Q8TE04 598 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 HACL1Q9UJ83 578 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
VRK3-210ENST00000596121 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
VRK3-210ENST00000596121 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
VRK3-210ENST00000596121 EPHX2P34913 555 aa13.98□□□□□ -0.17
VRK3-210ENST00000596121 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
VRK3-210ENST00000596121 A0A1B0GUL6 1792 aa13.97□□□□□ -0.17
VRK3-210ENST00000596121 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
VRK3-210ENST00000596121 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
VRK3-210ENST00000596121 VGLL2Q8N8G2 317 aa13.97□□□□□ -0.17
VRK3-210ENST00000596121 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
VRK3-210ENST00000596121 PA2G4Q9UQ80 394 aaKnown RBP13.97□□□□□ -0.17
VRK3-210ENST00000596121 IQCA1LA6NCM1 817 aa13.96□□□□□ -0.17
VRK3-210ENST00000596121 ZBTB7BO15156 539 aaPredicted RBP13.96□□□□□ -0.17
VRK3-210ENST00000596121 GNAI3P08754 354 aa13.96□□□□□ -0.17
VRK3-210ENST00000596121 VIL1P09327 827 aaKnown RBP13.96□□□□□ -0.17
VRK3-210ENST00000596121 TNIP1Q15025 636 aa13.96□□□□□ -0.17
VRK3-210ENST00000596121 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
VRK3-210ENST00000596121 MXD3Q9BW11 206 aa13.96□□□□□ -0.17
VRK3-210ENST00000596121 SCN4AP35499 1836 aa13.96□□□□□ -0.17
VRK3-210ENST00000596121 EYA2O00167 538 aa13.95□□□□□ -0.18
VRK3-210ENST00000596121 KCNJ4P48050 445 aa13.95□□□□□ -0.18
VRK3-210ENST00000596121 HIRAP54198 1017 aaPredicted RBP13.95□□□□□ -0.18
VRK3-210ENST00000596121 MTX1Q13505 466 aa13.95□□□□□ -0.18
VRK3-210ENST00000596121 C20orf194Q5TEA3 1177 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms