RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 MICALL2Q8IY33 904 aa21.86■■□□□ 1.09
CCDC9-202ENST00000595659 GLIS2Q9BZE0 524 aaPredicted RBP21.86■■□□□ 1.09
CCDC9-202ENST00000595659 ZC3H12CQ9C0D7 883 aaKnown RBP21.86■■□□□ 1.09
CCDC9-202ENST00000595659 FOXN1O15353 648 aa21.85■■□□□ 1.09
CCDC9-202ENST00000595659 NEXNQ0ZGT2 675 aa21.85■■□□□ 1.09
CCDC9-202ENST00000595659 GRM1Q13255 1194 aa21.85■■□□□ 1.09
CCDC9-202ENST00000595659 PAXIP1Q6ZW49 1069 aaPredicted RBP21.85■■□□□ 1.09
CCDC9-202ENST00000595659 NEURL1BA8MQ27 555 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 H7C1D1 291 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 CAPN15O75808 1086 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 CTSWP56202 376 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 SAMD7Q7Z3H4 446 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 ANKRD18AQ8IVF6 992 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 GGA1Q9UJY5 639 aa21.84■■□□□ 1.09
CCDC9-202ENST00000595659 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
CCDC9-202ENST00000595659 G3V3G9 751 aa21.83■■□□□ 1.09
CCDC9-202ENST00000595659 EXOSC9Q06265 439 aaKnown RBP21.83■■□□□ 1.09
CCDC9-202ENST00000595659 RBM26Q5T8P6 1007 aaKnown RBP21.83■■□□□ 1.09
CCDC9-202ENST00000595659 DCAF8Q5TAQ9 597 aa21.83■■□□□ 1.09
CCDC9-202ENST00000595659 FAM9BQ8IZU0 186 aa21.83■■□□□ 1.09
CCDC9-202ENST00000595659 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.09
CCDC9-202ENST00000595659 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
CCDC9-202ENST00000595659 WDR33Q9C0J8 1336 aaKnown RBP21.82■■□□□ 1.08
CCDC9-202ENST00000595659 WTIPA6NIX2 430 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-202ENST00000595659 CELF2O95319 508 aaKnown RBP21.82■■□□□ 1.08
CCDC9-202ENST00000595659 FLIIQ13045 1269 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 TBC1D10BQ4KMP7 808 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-202ENST00000595659 DLK2Q6UY11 383 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 UBE3BQ7Z3V4 1068 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 TTLL11Q8NHH1 800 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 GREM2Q9H772 168 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 ZNF408Q9H9D4 720 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 PGAP2Q9UHJ9 254 aa21.82■■□□□ 1.08
CCDC9-202ENST00000595659 LRRC37AA6NMS7 1700 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 VAMP4O75379 141 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 EGFRP00533 1210 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
CCDC9-202ENST00000595659 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
CCDC9-202ENST00000595659 CYP4F22Q6NT55 531 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 WDR63Q8IWG1 891 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 DPF2Q92785 391 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 AIDAQ96BJ3 306 aa21.81■■□□□ 1.08
CCDC9-202ENST00000595659 SPINK5Q9NQ38 1064 aaPredicted RBP21.81■■□□□ 1.08
CCDC9-202ENST00000595659 H7C1W4 665 aa21.8■■□□□ 1.08
CCDC9-202ENST00000595659 USP48Q86UV5 1035 aa21.8■■□□□ 1.08
CCDC9-202ENST00000595659 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
CCDC9-202ENST00000595659 WBP1LQ9NX94 342 aa21.8■■□□□ 1.08
CCDC9-202ENST00000595659 CAPNS2Q96L46 248 aa21.79■■□□□ 1.08
CCDC9-202ENST00000595659 CDC5LQ99459 802 aaKnown RBP21.79■■□□□ 1.08
CCDC9-202ENST00000595659 TLL2Q9Y6L7 1015 aa21.79■■□□□ 1.08
CCDC9-202ENST00000595659 GCKRQ14397 625 aa21.78■■□□□ 1.08
CCDC9-202ENST00000595659 CDC37L1Q7L3B6 337 aa21.78■■□□□ 1.08
CCDC9-202ENST00000595659 XDHP47989 1333 aa21.78■■□□□ 1.08
CCDC9-202ENST00000595659 VIL1P09327 827 aaKnown RBP21.77■■□□□ 1.08
CCDC9-202ENST00000595659 RPS12P25398 132 aaKnown RBP21.77■■□□□ 1.08
CCDC9-202ENST00000595659 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
CCDC9-202ENST00000595659 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
CCDC9-202ENST00000595659 F6X3S4 739 aa21.76■■□□□ 1.07
CCDC9-202ENST00000595659 ATP2B4P23634 1241 aa21.76■■□□□ 1.07
CCDC9-202ENST00000595659 CTCFP49711 727 aaPredicted RBP21.76■■□□□ 1.07
CCDC9-202ENST00000595659 AOC2O75106 756 aa21.75■■□□□ 1.07
CCDC9-202ENST00000595659 ECE1P42892 770 aa21.75■■□□□ 1.07
CCDC9-202ENST00000595659 LBX1P52954 281 aa21.75■■□□□ 1.07
CCDC9-202ENST00000595659 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
CCDC9-202ENST00000595659 CASP7P55210 303 aa21.74■■□□□ 1.07
CCDC9-202ENST00000595659 FAM161AQ3B820 660 aa21.74■■□□□ 1.07
CCDC9-202ENST00000595659 KRT26Q7Z3Y9 468 aa21.74■■□□□ 1.07
CCDC9-202ENST00000595659 SAPCD2Q86UD0 394 aa21.74■■□□□ 1.07
CCDC9-202ENST00000595659 ADM5C9JUS6 153 aa21.73■■□□□ 1.07
CCDC9-202ENST00000595659 ITGA6P23229 1130 aa21.73■■□□□ 1.07
CCDC9-202ENST00000595659 MAP2K1Q02750 393 aaPredicted RBP21.73■■□□□ 1.07
CCDC9-202ENST00000595659 KIF4BQ2VIQ3 1234 aa21.73■■□□□ 1.07
CCDC9-202ENST00000595659 RSBN1LQ6PCB5 846 aaPredicted RBP21.73■■□□□ 1.07
CCDC9-202ENST00000595659 LINS1Q8NG48 757 aa21.73■■□□□ 1.07
CCDC9-202ENST00000595659 MYH16Q9H6N6 1097 aa21.73■■□□□ 1.07
CCDC9-202ENST00000595659 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
CCDC9-202ENST00000595659 IGHMBP2P38935 993 aaKnown RBP21.72■■□□□ 1.07
CCDC9-202ENST00000595659 DCPSQ96C86 337 aaKnown RBP21.72■■□□□ 1.07
CCDC9-202ENST00000595659 PLA2G12BQ9BX93 195 aa21.72■■□□□ 1.07
CCDC9-202ENST00000595659 HSPA8P11142 646 aaKnown RBP21.71■■□□□ 1.07
CCDC9-202ENST00000595659 CCT4P50991 539 aaKnown RBP21.71■■□□□ 1.07
CCDC9-202ENST00000595659 FBXW7Q969H0 707 aa21.71■■□□□ 1.07
CCDC9-202ENST00000595659 MXD3Q9BW11 206 aa21.71■■□□□ 1.07
CCDC9-202ENST00000595659 PRDM10Q9NQV6 1147 aa21.71■■□□□ 1.07
CCDC9-202ENST00000595659 PODNQ7Z5L7 613 aa21.7■■□□□ 1.06
CCDC9-202ENST00000595659 TXNRD3Q86VQ6 643 aa21.7■■□□□ 1.06
CCDC9-202ENST00000595659 GGA3Q9NZ52 723 aa21.7■■□□□ 1.06
CCDC9-202ENST00000595659 USP17L3A6NCW0 530 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 USP17L4A6NCW7 530 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 CSF1RP07333 972 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 KLRK1P26718 216 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 BEND3Q5T5X7 828 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 USP17L1Q7RTZ2 530 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 TSKSQ9UJT2 592 aa21.69■■□□□ 1.06
CCDC9-202ENST00000595659 HUNKP57058 714 aa21.68■■□□□ 1.06
CCDC9-202ENST00000595659 ZNF280AP59817 542 aaPredicted RBP21.68■■□□□ 1.06
CCDC9-202ENST00000595659 SCARF1Q14162 830 aa21.68■■□□□ 1.06
CCDC9-202ENST00000595659 AGBL3Q8NEM8 1001 aa21.68■■□□□ 1.06
CCDC9-202ENST00000595659 GMLQ99445 158 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms