RNA–Protein interactions for RNA: ENST00000594656.1

PPFIA4-207, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-207ENST00000594656 LAMB2P55268 1798 aa16.82■□□□□ 0.28
PPFIA4-207ENST00000594656 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
PPFIA4-207ENST00000594656 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
PPFIA4-207ENST00000594656 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
PPFIA4-207ENST00000594656 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
PPFIA4-207ENST00000594656 KIF4BQ2VIQ3 1234 aa16.81■□□□□ 0.28
PPFIA4-207ENST00000594656 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
PPFIA4-207ENST00000594656 EYA3Q99504 573 aa16.81■□□□□ 0.28
PPFIA4-207ENST00000594656 COL4A1P02462 1669 aa16.81■□□□□ 0.28
PPFIA4-207ENST00000594656 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 ZNF280AP59817 542 aaPredicted RBP16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 SULF1Q8IWU6 871 aa16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 GGA3Q9NZ52 723 aa16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
PPFIA4-207ENST00000594656 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
PPFIA4-207ENST00000594656 SCARF1Q14162 830 aa16.79■□□□□ 0.28
PPFIA4-207ENST00000594656 CTU1Q7Z7A3 348 aaKnown RBP16.79■□□□□ 0.28
PPFIA4-207ENST00000594656 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
PPFIA4-207ENST00000594656 RASAL3Q86YV0 1011 aa16.78■□□□□ 0.28
PPFIA4-207ENST00000594656 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-207ENST00000594656 GMLQ99445 158 aa16.78■□□□□ 0.28
PPFIA4-207ENST00000594656 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
PPFIA4-207ENST00000594656 LRRC37AA6NMS7 1700 aa16.78■□□□□ 0.28
PPFIA4-207ENST00000594656 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
PPFIA4-207ENST00000594656 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
PPFIA4-207ENST00000594656 ANGEL2Q5VTE6 544 aaKnown RBP16.77■□□□□ 0.28
PPFIA4-207ENST00000594656 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 RSBN1LQ6PCB5 846 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 MOB2Q70IA6 237 aa16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 DBF4Q9UBU7 674 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
PPFIA4-207ENST00000594656 HOXB7P09629 217 aa16.75■□□□□ 0.27
PPFIA4-207ENST00000594656 FKBP1BP68106 108 aa16.75■□□□□ 0.27
PPFIA4-207ENST00000594656 SCAF8Q9UPN6 1271 aaKnown RBP16.75■□□□□ 0.27
PPFIA4-207ENST00000594656 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
PPFIA4-207ENST00000594656 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 WTIPA6NIX2 430 aaPredicted RBP16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 UBE2Q2LH0YL09 131 aa16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 UFL1O94874 794 aa16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 PRPF38BQ5VTL8 546 aaKnown RBP16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 ZBTB38Q8NAP3 1195 aaPredicted RBP16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 HYPKQ9NX55 129 aa16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
PPFIA4-207ENST00000594656 TBC1D8O95759 1140 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 PRAMEF18Q5VWM3 479 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 ZNF296Q8WUU4 475 aaPredicted RBP16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 MYOZ2Q9NPC6 264 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
PPFIA4-207ENST00000594656 ZNF609O15014 1411 aa16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 G3V3G9 751 aa16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 TM4SF4P48230 202 aa16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 PKN2Q16513 984 aaKnown RBP16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 DUSP27Q5VZP5 1158 aa16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
PPFIA4-207ENST00000594656 PITPNM2Q9BZ72 1349 aa16.71■□□□□ 0.27
PPFIA4-207ENST00000594656 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
PPFIA4-207ENST00000594656 USP17L3A6NCW0 530 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 USP17L4A6NCW7 530 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 USP17L1Q7RTZ2 530 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 PODNQ7Z5L7 613 aa16.7■□□□□ 0.26
PPFIA4-207ENST00000594656 GPR25O00155 361 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 PCCAP05165 728 aaPredicted RBP16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 RALBP1Q15311 655 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
PPFIA4-207ENST00000594656 PDE8AO60658 829 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 ZNF853P0CG23 659 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 CCDC191Q8NCU4 936 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 MYD88Q99836 296 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 XDHP47989 1333 aa16.68■□□□□ 0.26
PPFIA4-207ENST00000594656 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
PPFIA4-207ENST00000594656 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
PPFIA4-207ENST00000594656 WNT10BO00744 389 aa16.66■□□□□ 0.26
PPFIA4-207ENST00000594656 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
PPFIA4-207ENST00000594656 ANKRD18AQ8IVF6 992 aa16.66■□□□□ 0.26
PPFIA4-207ENST00000594656 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
PPFIA4-207ENST00000594656 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 FBXO46Q6PJ61 603 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 MINPP1Q9UNW1 487 aa16.65■□□□□ 0.26
PPFIA4-207ENST00000594656 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms