RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 SSH3Q8TE77 659 aa14.03□□□□□ -0.16
XRCC1-204ENST00000594511 TAOK3Q9H2K8 898 aa14.03□□□□□ -0.16
XRCC1-204ENST00000594511 UTRNP46939 3433 aa14.02□□□□□ -0.16
XRCC1-204ENST00000594511 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.16
XRCC1-204ENST00000594511 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
XRCC1-204ENST00000594511 GPSM2P81274 684 aa14.02□□□□□ -0.17
XRCC1-204ENST00000594511 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
XRCC1-204ENST00000594511 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
XRCC1-204ENST00000594511 POLLQ9UGP5 575 aa14.02□□□□□ -0.17
XRCC1-204ENST00000594511 XDHP47989 1333 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 CIAO1O76071 339 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 RASSF7Q02833 373 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 DPP8Q6V1X1 898 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-204ENST00000594511 LDHAL6AQ6ZMR3 332 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 C15orf52Q6ZUT6 534 aaKnown RBP14.01□□□□□ -0.17
XRCC1-204ENST00000594511 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-204ENST00000594511 MPHOSPH8Q99549 860 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-204ENST00000594511 LEMD3Q9Y2U8 911 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
XRCC1-204ENST00000594511 SPEF2Q9C093 1822 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 ATP2B4P23634 1241 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 CHRNDQ07001 517 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 C9orf131Q5VYM1 1079 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
XRCC1-204ENST00000594511 VGLL2Q8N8G2 317 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 PUS3Q9BZE2 481 aaKnown RBP14□□□□□ -0.17
XRCC1-204ENST00000594511 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
XRCC1-204ENST00000594511 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 EYA2O00167 538 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 IARSP41252 1262 aaKnown RBP13.99□□□□□ -0.17
XRCC1-204ENST00000594511 AAMPQ13685 434 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 LRRC24Q50LG9 513 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 CEP85Q6P2H3 762 aa13.99□□□□□ -0.17
XRCC1-204ENST00000594511 NSFL1CQ9UNZ2 370 aaKnown RBP13.99□□□□□ -0.17
XRCC1-204ENST00000594511 NOP58Q9Y2X3 529 aaKnown RBP13.99□□□□□ -0.17
XRCC1-204ENST00000594511 COL4A5P29400 1685 aa13.98□□□□□ -0.17
XRCC1-204ENST00000594511 FZD9O00144 591 aa13.98□□□□□ -0.17
XRCC1-204ENST00000594511 SRGAP3O43295 1099 aa13.98□□□□□ -0.17
XRCC1-204ENST00000594511 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
XRCC1-204ENST00000594511 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
XRCC1-204ENST00000594511 GGA1Q9UJY5 639 aa13.98□□□□□ -0.17
XRCC1-204ENST00000594511 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
XRCC1-204ENST00000594511 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
XRCC1-204ENST00000594511 ZBTB22O15209 634 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 UBE4AQ14139 1066 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 EYA3Q99504 573 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 CNNM1Q9NRU3 951 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
XRCC1-204ENST00000594511 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
XRCC1-204ENST00000594511 PDE8BO95263 885 aa13.96□□□□□ -0.17
XRCC1-204ENST00000594511 FGFR2P21802 821 aa13.96□□□□□ -0.17
XRCC1-204ENST00000594511 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
XRCC1-204ENST00000594511 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
XRCC1-204ENST00000594511 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.17
XRCC1-204ENST00000594511 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
XRCC1-204ENST00000594511 UFL1O94874 794 aa13.95□□□□□ -0.18
XRCC1-204ENST00000594511 WASHC4Q2M389 1173 aa13.95□□□□□ -0.18
XRCC1-204ENST00000594511 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
XRCC1-204ENST00000594511 C6orf229H3BNL8 230 aa13.94□□□□□ -0.18
XRCC1-204ENST00000594511 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
XRCC1-204ENST00000594511 TAF5LO75529 589 aa13.94□□□□□ -0.18
XRCC1-204ENST00000594511 AOC3Q16853 763 aa13.94□□□□□ -0.18
XRCC1-204ENST00000594511 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
XRCC1-204ENST00000594511 TIAM2Q8IVF5 1701 aa13.93□□□□□ -0.18
XRCC1-204ENST00000594511 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
XRCC1-204ENST00000594511 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
XRCC1-204ENST00000594511 HELBQ8NG08 1087 aaPredicted RBP13.93□□□□□ -0.18
XRCC1-204ENST00000594511 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
XRCC1-204ENST00000594511 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
XRCC1-204ENST00000594511 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
XRCC1-204ENST00000594511 GLTPD2A6NH11 291 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 YDJCA8MPS7 323 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 SNAP23O00161 211 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 SASH1O94885 1247 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 PODNQ7Z5L7 613 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 FBXO33Q7Z6M2 555 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 GPR108Q9NPR9 543 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
XRCC1-204ENST00000594511 ZNF609O15014 1411 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 HMMRO75330 724 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 IL1R1P14778 569 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 YY1P25490 414 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
XRCC1-204ENST00000594511 NIM1KQ8IY84 436 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 LPIN2Q92539 896 aa13.91□□□□□ -0.18
XRCC1-204ENST00000594511 FAM84BQ96KN1 310 aaPredicted RBP13.91□□□□□ -0.18
XRCC1-204ENST00000594511 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
XRCC1-204ENST00000594511 PSME4Q14997 1843 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms