RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ANKRD18BA2A2Z9 1011 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 GRM8O00222 908 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 UFL1O94874 794 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 CXCL9Q07325 125 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 SSH1Q8WYL5 1049 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 SMC4Q9NTJ3 1288 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 BSDC1Q9NW68 430 aaPredicted RBP21.95■■□□□ 1.1
IRF3-208ENST00000594387 XDHP47989 1333 aa21.95■■□□□ 1.1
IRF3-208ENST00000594387 ITGA6P23229 1130 aa21.94■■□□□ 1.1
IRF3-208ENST00000594387 ATP2B4P23634 1241 aa21.94■■□□□ 1.1
IRF3-208ENST00000594387 DUOX1Q9NRD9 1551 aa21.94■■□□□ 1.1
IRF3-208ENST00000594387 COL4A1P02462 1669 aa21.94■■□□□ 1.1
IRF3-208ENST00000594387 RAD17O75943 681 aa21.93■■□□□ 1.1
IRF3-208ENST00000594387 CASP7P55210 303 aa21.93■■□□□ 1.1
IRF3-208ENST00000594387 IFIT5Q13325 482 aaKnown RBP21.93■■□□□ 1.1
IRF3-208ENST00000594387 LTBP1Q14766 1721 aa21.93■■□□□ 1.1
IRF3-208ENST00000594387 TRMT2AQ8IZ69 625 aaKnown RBP21.93■■□□□ 1.1
IRF3-208ENST00000594387 DBNDD1Q9H9R9 158 aa21.93■■□□□ 1.1
IRF3-208ENST00000594387 CSF1RP07333 972 aa21.92■■□□□ 1.1
IRF3-208ENST00000594387 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
IRF3-208ENST00000594387 TAF7LQ5H9L4 462 aa21.91■■□□□ 1.1
IRF3-208ENST00000594387 ANKRD2Q9GZV1 360 aa21.91■■□□□ 1.1
IRF3-208ENST00000594387 ECE2O60344 883 aa21.9■■□□□ 1.1
IRF3-208ENST00000594387 HNRNPUQ00839 825 aaKnown RBP eCLIP21.9■■□□□ 1.12e-8■□□□□ 8.3
IRF3-208ENST00000594387 DOK7Q18PE1 504 aa21.9■■□□□ 1.1
IRF3-208ENST00000594387 CCDC57Q2TAC2 916 aa21.9■■□□□ 1.1
IRF3-208ENST00000594387 USP50Q70EL3 339 aaPredicted RBP21.9■■□□□ 1.1
IRF3-208ENST00000594387 MINPP1Q9UNW1 487 aa21.9■■□□□ 1.1
IRF3-208ENST00000594387 POTEIP0CG38 1075 aa21.89■■□□□ 1.09
IRF3-208ENST00000594387 POTEJP0CG39 1038 aa21.89■■□□□ 1.09
IRF3-208ENST00000594387 EPS15P42566 896 aa21.89■■□□□ 1.09
IRF3-208ENST00000594387 SCNN1DP51172 638 aa21.89■■□□□ 1.09
IRF3-208ENST00000594387 ADARB2Q9NS39 739 aaKnown RBP21.89■■□□□ 1.09
IRF3-208ENST00000594387 GPRC5DQ9NZD1 345 aa21.89■■□□□ 1.09
IRF3-208ENST00000594387 H7C1D1 291 aa21.88■■□□□ 1.09
IRF3-208ENST00000594387 KCNJ4P48050 445 aa21.88■■□□□ 1.09
IRF3-208ENST00000594387 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
IRF3-208ENST00000594387 FOXO4P98177 505 aa21.88■■□□□ 1.09
IRF3-208ENST00000594387 LMBR1LQ6UX01 489 aa21.88■■□□□ 1.09
IRF3-208ENST00000594387 LEMD3Q9Y2U8 911 aa21.88■■□□□ 1.09
IRF3-208ENST00000594387 YDJCA8MPS7 323 aa21.87■■□□□ 1.09
IRF3-208ENST00000594387 CCT4P50991 539 aaKnown RBP21.87■■□□□ 1.09
IRF3-208ENST00000594387 GPR101Q96P66 508 aaPredicted RBP21.87■■□□□ 1.09
IRF3-208ENST00000594387 PSME4Q14997 1843 aa21.86■■□□□ 1.09
IRF3-208ENST00000594387 ADAMTSL1Q8N6G6 1762 aa21.85■■□□□ 1.09
IRF3-208ENST00000594387 PSMD14O00487 310 aa21.85■■□□□ 1.09
IRF3-208ENST00000594387 RPS12P25398 132 aaKnown RBP21.85■■□□□ 1.09
IRF3-208ENST00000594387 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
IRF3-208ENST00000594387 API5Q9BZZ5 524 aaKnown RBP21.85■■□□□ 1.09
IRF3-208ENST00000594387 CNOT7Q9UIV1 285 aaKnown RBP21.85■■□□□ 1.09
IRF3-208ENST00000594387 PODNQ7Z5L7 613 aa21.84■■□□□ 1.09
IRF3-208ENST00000594387 DPF2Q92785 391 aa21.84■■□□□ 1.09
IRF3-208ENST00000594387 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
IRF3-208ENST00000594387 HDAC5Q9UQL6 1122 aa21.84■■□□□ 1.09
IRF3-208ENST00000594387 ZNF804BA4D1E1 1349 aa21.83■■□□□ 1.09
IRF3-208ENST00000594387 SCN9AQ15858 1988 aa21.83■■□□□ 1.09
IRF3-208ENST00000594387 NBPF7P0C2Y1 421 aaPredicted RBP21.83■■□□□ 1.09
IRF3-208ENST00000594387 CHRNDQ07001 517 aa21.83■■□□□ 1.09
IRF3-208ENST00000594387 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
IRF3-208ENST00000594387 LDHAL6AQ6ZMR3 332 aa21.83■■□□□ 1.09
IRF3-208ENST00000594387 CNNM1Q9NRU3 951 aa21.83■■□□□ 1.09
IRF3-208ENST00000594387 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.08
IRF3-208ENST00000594387 MED23Q9ULK4 1368 aa21.83■■□□□ 1.08
IRF3-208ENST00000594387 HTRA3P83110 453 aa21.82■■□□□ 1.08
IRF3-208ENST00000594387 MICALL2Q8IY33 904 aa21.82■■□□□ 1.08
IRF3-208ENST00000594387 SUCLG2Q96I99 432 aa21.82■■□□□ 1.08
IRF3-208ENST00000594387 ZBTB12Q9Y330 459 aaPredicted RBP21.82■■□□□ 1.08
IRF3-208ENST00000594387 UTYO14607 1347 aa21.81■■□□□ 1.08
IRF3-208ENST00000594387 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
IRF3-208ENST00000594387 POLR2AP24928 1970 aaKnown RBP21.81■■□□□ 1.08
IRF3-208ENST00000594387 IPO8O15397 1037 aaKnown RBP21.81■■□□□ 1.08
IRF3-208ENST00000594387 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
IRF3-208ENST00000594387 EPHA10Q5JZY3 1008 aa21.81■■□□□ 1.08
IRF3-208ENST00000594387 CREBZFQ9NS37 354 aa21.81■■□□□ 1.08
IRF3-208ENST00000594387 A0A1B0GUL6 1792 aa21.81■■□□□ 1.08
IRF3-208ENST00000594387 ITGBL1O95965 494 aaPredicted RBP21.8■■□□□ 1.08
IRF3-208ENST00000594387 RARSP54136 660 aaKnown RBP21.8■■□□□ 1.08
IRF3-208ENST00000594387 KLRG1Q96E93 195 aa21.8■■□□□ 1.08
IRF3-208ENST00000594387 COA1Q9GZY4 146 aa21.8■■□□□ 1.08
IRF3-208ENST00000594387 KCNQ5Q9NR82 932 aa21.8■■□□□ 1.08
IRF3-208ENST00000594387 USP17L3A6NCW0 530 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 USP17L4A6NCW7 530 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 PLIN1O60240 522 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 VIL1P09327 827 aaKnown RBP21.79■■□□□ 1.08
IRF3-208ENST00000594387 USP17L1Q7RTZ2 530 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 DNAJC5GQ8N7S2 189 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 ZC3H15Q8WU90 426 aaKnown RBP21.79■■□□□ 1.08
IRF3-208ENST00000594387 FBXW7Q969H0 707 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 ZNF594Q96JF6 807 aaPredicted RBP21.79■■□□□ 1.08
IRF3-208ENST00000594387 PASKQ96RG2 1323 aa21.79■■□□□ 1.08
IRF3-208ENST00000594387 TMEM88BA6NKF7 163 aa21.78■■□□□ 1.08
IRF3-208ENST00000594387 AGBL3Q8NEM8 1001 aa21.78■■□□□ 1.08
IRF3-208ENST00000594387 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
IRF3-208ENST00000594387 USP44Q9H0E7 712 aa21.78■■□□□ 1.08
IRF3-208ENST00000594387 BICC1Q9H694 974 aaKnown RBP21.78■■□□□ 1.08
IRF3-208ENST00000594387 TAF5LO75529 589 aa21.77■■□□□ 1.08
IRF3-208ENST00000594387 RBM26Q5T8P6 1007 aaKnown RBP21.77■■□□□ 1.08
IRF3-208ENST00000594387 RSBN1LQ6PCB5 846 aaPredicted RBP21.77■■□□□ 1.08
IRF3-208ENST00000594387 HELBQ8NG08 1087 aaPredicted RBP21.77■■□□□ 1.08
IRF3-208ENST00000594387 UBTFL1P0CB47 393 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms