RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
LTBP4-209ENST00000594116 DEFB115Q30KQ5 88 aa21.52■■□□□ 1.04
LTBP4-209ENST00000594116 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
LTBP4-209ENST00000594116 GPSM2P81274 684 aa21.51■■□□□ 1.03
LTBP4-209ENST00000594116 TNS4Q8IZW8 715 aa21.51■■□□□ 1.03
LTBP4-209ENST00000594116 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
LTBP4-209ENST00000594116 THSD7BQ9C0I4 1608 aa21.51■■□□□ 1.03
LTBP4-209ENST00000594116 MYH3P11055 1940 aa21.51■■□□□ 1.03
LTBP4-209ENST00000594116 IPO8O15397 1037 aaKnown RBP21.5■■□□□ 1.03
LTBP4-209ENST00000594116 PDE8AO60658 829 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 CCDC152Q4G0S7 254 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 KSR2Q6VAB6 950 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 EYA3Q99504 573 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 API5Q9BZZ5 524 aaKnown RBP21.5■■□□□ 1.03
LTBP4-209ENST00000594116 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 PGAP2Q9UHJ9 254 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 ABT1Q9ULW3 272 aaKnown RBP21.5■■□□□ 1.03
LTBP4-209ENST00000594116 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
LTBP4-209ENST00000594116 C6orf229H3BNL8 230 aa21.49■■□□□ 1.03
LTBP4-209ENST00000594116 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
LTBP4-209ENST00000594116 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.034e-14■■■■■ 53.9
LTBP4-209ENST00000594116 ATF7IPQ6VMQ6 1270 aa21.49■■□□□ 1.03
LTBP4-209ENST00000594116 ZC3H15Q8WU90 426 aaKnown RBP21.49■■□□□ 1.03
LTBP4-209ENST00000594116 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
LTBP4-209ENST00000594116 SEC31BQ9NQW1 1179 aa21.49■■□□□ 1.03
LTBP4-209ENST00000594116 PI4KAP2A4QPH2 592 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 TRAF5O00463 557 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 TRIM27P14373 513 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 PI4KAP1Q8N8J0 262 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.48■■□□□ 1.03
LTBP4-209ENST00000594116 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 DPF2Q92785 391 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
LTBP4-209ENST00000594116 CNOT7Q9UIV1 285 aaKnown RBP21.48■■□□□ 1.03
LTBP4-209ENST00000594116 FOXN1O15353 648 aa21.47■■□□□ 1.03
LTBP4-209ENST00000594116 CST9Q5W186 159 aa21.47■■□□□ 1.03
LTBP4-209ENST00000594116 WBP1LQ9NX94 342 aa21.47■■□□□ 1.03
LTBP4-209ENST00000594116 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
LTBP4-209ENST00000594116 SCN9AQ15858 1988 aa21.47■■□□□ 1.03
LTBP4-209ENST00000594116 PSMD14O00487 310 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 RIMBP2O15034 1052 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 ECE2O60344 883 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 IGKV5-2P06315 115 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 HIRAP54198 1017 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-209ENST00000594116 TRPM4Q8TD43 1214 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 DNAAF4Q8WXU2 420 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 AIDAQ96BJ3 306 aa21.46■■□□□ 1.03
LTBP4-209ENST00000594116 SUPT16HQ9Y5B9 1047 aaKnown RBP21.46■■□□□ 1.03
LTBP4-209ENST00000594116 F6X3S4 739 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 H7C1D1 291 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 RPS12P25398 132 aaKnown RBP21.45■■□□□ 1.02
LTBP4-209ENST00000594116 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 MICALL2Q8IY33 904 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 JARID2Q92833 1246 aaPredicted RBP21.45■■□□□ 1.02
LTBP4-209ENST00000594116 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 ZBTB12Q9Y330 459 aaPredicted RBP21.45■■□□□ 1.02
LTBP4-209ENST00000594116 TLL2Q9Y6L7 1015 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 PSME4Q14997 1843 aa21.45■■□□□ 1.02
LTBP4-209ENST00000594116 SHTN1A0MZ66 631 aa21.44■■□□□ 1.02
LTBP4-209ENST00000594116 PLIN1O60240 522 aa21.44■■□□□ 1.02
LTBP4-209ENST00000594116 ZC3H12CQ9C0D7 883 aaKnown RBP21.44■■□□□ 1.02
LTBP4-209ENST00000594116 ANKIB1Q9P2G1 1089 aa21.44■■□□□ 1.02
LTBP4-209ENST00000594116 RTL9Q8NET4 1388 aa21.44■■□□□ 1.02
LTBP4-209ENST00000594116 UFL1O94874 794 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 CTCFP49711 727 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-209ENST00000594116 CTSWP56202 376 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 DOK7Q18PE1 504 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 ANKRD18AQ8IVF6 992 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 GPR101Q96P66 508 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-209ENST00000594116 GLIS2Q9BZE0 524 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-209ENST00000594116 PRDM10Q9NQV6 1147 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 GGA1Q9UJY5 639 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 SPEF2Q9C093 1822 aa21.43■■□□□ 1.02
LTBP4-209ENST00000594116 ZNF609O15014 1411 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 MS4A1P11836 297 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 ECE1P42892 770 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 XDHP47989 1333 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 MAP2K1Q02750 393 aaPredicted RBP21.42■■□□□ 1.02
LTBP4-209ENST00000594116 CDC37L1Q7L3B6 337 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 DZIP1LQ8IYY4 767 aaKnown RBP21.42■■□□□ 1.02
LTBP4-209ENST00000594116 CAPNS2Q96L46 248 aa21.42■■□□□ 1.02
LTBP4-209ENST00000594116 CCDC85AQ96PX6 553 aaPredicted RBP21.42■■□□□ 1.02
LTBP4-209ENST00000594116 NEURL1BA8MQ27 555 aa21.41■■□□□ 1.02
LTBP4-209ENST00000594116 CELF2O95319 508 aaKnown RBP21.41■■□□□ 1.02
LTBP4-209ENST00000594116 PDE3AQ14432 1141 aa21.41■■□□□ 1.02
LTBP4-209ENST00000594116 BEND3Q5T5X7 828 aa21.41■■□□□ 1.02
LTBP4-209ENST00000594116 CDC5LQ99459 802 aaKnown RBP21.41■■□□□ 1.02
LTBP4-209ENST00000594116 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
LTBP4-209ENST00000594116 RLBP1P12271 317 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 CWF19L2Q2TBE0 894 aaKnown RBP21.4■■□□□ 1.02
LTBP4-209ENST00000594116 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
LTBP4-209ENST00000594116 SAPCD2Q86UD0 394 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 LINS1Q8NG48 757 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 TTLL11Q8NHH1 800 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
LTBP4-209ENST00000594116 VIL1P09327 827 aaKnown RBP21.39■■□□□ 1.01
LTBP4-209ENST00000594116 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
LTBP4-209ENST00000594116 SLC4A10Q6U841 1118 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms