RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 EPHA10Q5JZY3 1008 aa23.44■■□□□ 1.34
SHKBP1-202ENST00000593764 MINPP1Q9UNW1 487 aa23.44■■□□□ 1.34
SHKBP1-202ENST00000593764 APLP1P51693 650 aa23.43■■□□□ 1.34
SHKBP1-202ENST00000593764 EYA3Q99504 573 aa23.43■■□□□ 1.34
SHKBP1-202ENST00000593764 SMC4Q9NTJ3 1288 aa23.43■■□□□ 1.34
SHKBP1-202ENST00000593764 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
SHKBP1-202ENST00000593764 GGA1Q9UJY5 639 aa23.43■■□□□ 1.34
SHKBP1-202ENST00000593764 XDHP47989 1333 aa23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 WTIPA6NIX2 430 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 RAD17O75943 681 aa23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 UFL1O94874 794 aa23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 EPS15P42566 896 aa23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 DBNDD1Q9H9R9 158 aa23.42■■□□□ 1.34
SHKBP1-202ENST00000593764 CIAPIN1Q6FI81 312 aa23.41■■□□□ 1.34
SHKBP1-202ENST00000593764 CHADLQ6NUI6 762 aa23.41■■□□□ 1.34
SHKBP1-202ENST00000593764 LDHDQ86WU2 507 aa23.41■■□□□ 1.34
SHKBP1-202ENST00000593764 UTYO14607 1347 aa23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 NBPF7P0C2Y1 421 aaPredicted RBP23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 BRPF1P55201 1214 aaPredicted RBP23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 DOK7Q18PE1 504 aa23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 EAPPQ56P03 285 aaPredicted RBP23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 ZC3H12CQ9C0D7 883 aaKnown RBP23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 KCNQ5Q9NR82 932 aa23.4■■□□□ 1.34
SHKBP1-202ENST00000593764 ATP2B4P23634 1241 aa23.39■■□□□ 1.33
SHKBP1-202ENST00000593764 RARSP54136 660 aaKnown RBP23.39■■□□□ 1.33
SHKBP1-202ENST00000593764 HNRNPUQ00839 825 aaKnown RBP eCLIP23.39■■□□□ 1.33
SHKBP1-202ENST00000593764 TNIP1Q15025 636 aa23.39■■□□□ 1.33
SHKBP1-202ENST00000593764 PNMA8AQ86V59 439 aaPredicted RBP23.39■■□□□ 1.33
SHKBP1-202ENST00000593764 ANKRD18BA2A2Z9 1011 aa23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 ECE2O60344 883 aa23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 LMOD1P29536 600 aaPredicted RBP23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 GMPSP49915 693 aaPredicted RBP23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 GPRC5DQ9NZD1 345 aa23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 SPEF2Q9C093 1822 aa23.38■■□□□ 1.33
SHKBP1-202ENST00000593764 HTRA3P83110 453 aa23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 DNAJC5GQ8N7S2 189 aa23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 NOB1Q9ULX3 412 aaKnown RBP23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 ADAMTSL1Q8N6G6 1762 aa23.37■■□□□ 1.33
SHKBP1-202ENST00000593764 PSMD14O00487 310 aa23.36■■□□□ 1.33
SHKBP1-202ENST00000593764 CCT4P50991 539 aaKnown RBP23.36■■□□□ 1.33
SHKBP1-202ENST00000593764 CHMP3Q9Y3E7 222 aa23.36■■□□□ 1.33
SHKBP1-202ENST00000593764 USP44Q9H0E7 712 aa23.35■■□□□ 1.33
SHKBP1-202ENST00000593764 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
SHKBP1-202ENST00000593764 CLEC11AQ9Y240 323 aa23.34■■□□□ 1.33
SHKBP1-202ENST00000593764 ZBTB12Q9Y330 459 aaPredicted RBP23.34■■□□□ 1.33
SHKBP1-202ENST00000593764 SCN9AQ15858 1988 aa23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 CHRNDQ07001 517 aa23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 CCDC57Q2TAC2 916 aa23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 ANKRD2Q9GZV1 360 aa23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 ADARB2Q9NS39 739 aaKnown RBP23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 LEMD3Q9Y2U8 911 aa23.33■■□□□ 1.33
SHKBP1-202ENST00000593764 SHTN1A0MZ66 631 aa23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 VIL1P09327 827 aaKnown RBP23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 DPF2Q92785 391 aa23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 BICC1Q9H694 974 aaKnown RBP23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 CNOT7Q9UIV1 285 aaKnown RBP23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 PASKQ96RG2 1323 aa23.32■■□□□ 1.32
SHKBP1-202ENST00000593764 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 G3V3G9 751 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 DCAF8Q5TAQ9 597 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 MAP1SQ66K74 1059 aaPredicted RBP23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 TXNRD3Q86VQ6 643 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 ANKRD44Q8N8A2 993 aa23.31■■□□□ 1.32
SHKBP1-202ENST00000593764 ZNF804BA4D1E1 1349 aa23.3■■□□□ 1.32
SHKBP1-202ENST00000593764 SNAP23O00161 211 aa23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 KLRK1P26718 216 aa23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 HIRAP54198 1017 aaPredicted RBP23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 HELBQ8NG08 1087 aaPredicted RBP23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 API5Q9BZZ5 524 aaKnown RBP23.29■■□□□ 1.32
SHKBP1-202ENST00000593764 TAF5LO75529 589 aa23.28■■□□□ 1.32
SHKBP1-202ENST00000593764 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
SHKBP1-202ENST00000593764 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
SHKBP1-202ENST00000593764 TRPM4Q8TD43 1214 aa23.28■■□□□ 1.32
SHKBP1-202ENST00000593764 BCAR3O75815 825 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 TAF7LQ5H9L4 462 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 PGAP2Q9UHJ9 254 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 ZBED9Q6R2W3 1325 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 KIF16BQ96L93 1317 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 IRS2Q9Y4H2 1338 aa23.27■■□□□ 1.32
SHKBP1-202ENST00000593764 H7C1D1 291 aa23.26■■□□□ 1.31
SHKBP1-202ENST00000593764 PUS3Q9BZE2 481 aaKnown RBP23.26■■□□□ 1.31
SHKBP1-202ENST00000593764 COA1Q9GZY4 146 aa23.26■■□□□ 1.31
SHKBP1-202ENST00000593764 CNNM1Q9NRU3 951 aa23.26■■□□□ 1.31
SHKBP1-202ENST00000593764 PCNTO95613 3336 aa23.26■■□□□ 1.31
SHKBP1-202ENST00000593764 RSBN1LQ6PCB5 846 aaPredicted RBP23.25■■□□□ 1.31
SHKBP1-202ENST00000593764 KLRG1Q96E93 195 aa23.25■■□□□ 1.31
SHKBP1-202ENST00000593764 GMLQ99445 158 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms