RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CWC25Q9NXE8 425 aaPredicted RBP29.23■■■□□ 2.27
SSBP4-203ENST00000593641 PCCAP05165 728 aaPredicted RBP29.22■■■□□ 2.27
SSBP4-203ENST00000593641 DOK7Q18PE1 504 aa29.22■■■□□ 2.27
SSBP4-203ENST00000593641 C8orf58Q8NAV2 365 aa29.22■■■□□ 2.27
SSBP4-203ENST00000593641 HHIPL1Q96JK4 782 aa29.22■■■□□ 2.27
SSBP4-203ENST00000593641 ZC3H12CQ9C0D7 883 aaKnown RBP29.22■■■□□ 2.27
SSBP4-203ENST00000593641 SCN9AQ15858 1988 aa29.21■■■□□ 2.27
SSBP4-203ENST00000593641 SAMD7Q7Z3H4 446 aa29.21■■■□□ 2.27
SSBP4-203ENST00000593641 SEC31BQ9NQW1 1179 aa29.21■■■□□ 2.27
SSBP4-203ENST00000593641 ANKIB1Q9P2G1 1089 aa29.21■■■□□ 2.27
SSBP4-203ENST00000593641 G3V3G9 751 aa29.2■■■□□ 2.26
SSBP4-203ENST00000593641 PDE8AO60658 829 aa29.2■■■□□ 2.26
SSBP4-203ENST00000593641 DCAF8Q5TAQ9 597 aa29.2■■■□□ 2.26
SSBP4-203ENST00000593641 PODXL2Q9NZ53 605 aa29.2■■■□□ 2.26
SSBP4-203ENST00000593641 RTL9Q8NET4 1388 aa29.19■■■□□ 2.26
SSBP4-203ENST00000593641 AOC2O75106 756 aa29.19■■■□□ 2.26
SSBP4-203ENST00000593641 UFL1O94874 794 aa29.19■■■□□ 2.26
SSBP4-203ENST00000593641 TBC1D10BQ4KMP7 808 aaPredicted RBP29.19■■■□□ 2.26
SSBP4-203ENST00000593641 METTL22Q9BUU2 404 aaPredicted RBP29.19■■■□□ 2.26
SSBP4-203ENST00000593641 GGA1Q9UJY5 639 aa29.19■■■□□ 2.26
SSBP4-203ENST00000593641 MYH3P11055 1940 aa29.18■■■□□ 2.26
SSBP4-203ENST00000593641 USP48Q86UV5 1035 aa29.18■■■□□ 2.26
SSBP4-203ENST00000593641 CCDC85AQ96PX6 553 aaPredicted RBP29.17■■■□□ 2.26
SSBP4-203ENST00000593641 KRT26Q7Z3Y9 468 aa29.16■■■□□ 2.26
SSBP4-203ENST00000593641 KCNQ5Q9NR82 932 aa29.16■■■□□ 2.26
SSBP4-203ENST00000593641 MAP3K2Q9Y2U5 619 aa29.16■■■□□ 2.26
SSBP4-203ENST00000593641 RBM26Q5T8P6 1007 aaKnown RBP29.15■■■□□ 2.26
SSBP4-203ENST00000593641 ANKRD18AQ8IVF6 992 aa29.15■■■□□ 2.26
SSBP4-203ENST00000593641 JARID2Q92833 1246 aaPredicted RBP29.15■■■□□ 2.26
SSBP4-203ENST00000593641 STK31Q9BXU1 1019 aa29.15■■■□□ 2.26
SSBP4-203ENST00000593641 PSME4Q14997 1843 aa29.15■■■□□ 2.26
SSBP4-203ENST00000593641 CA12O43570 354 aa29.14■■■□□ 2.26
SSBP4-203ENST00000593641 EGFRP00533 1210 aa29.14■■■□□ 2.26
SSBP4-203ENST00000593641 TSPYL6Q8N831 410 aa29.14■■■□□ 2.26
SSBP4-203ENST00000593641 DCPSQ96C86 337 aaKnown RBP29.14■■■□□ 2.26
SSBP4-203ENST00000593641 VIL1P09327 827 aaKnown RBP29.13■■■□□ 2.25
SSBP4-203ENST00000593641 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
SSBP4-203ENST00000593641 HUNKP57058 714 aa29.13■■■□□ 2.25
SSBP4-203ENST00000593641 KIF4BQ2VIQ3 1234 aa29.13■■■□□ 2.25
SSBP4-203ENST00000593641 KSR2Q6VAB6 950 aa29.13■■■□□ 2.25
SSBP4-203ENST00000593641 NEXNQ0ZGT2 675 aa29.12■■■□□ 2.25
SSBP4-203ENST00000593641 TSR2Q969E8 191 aaKnown RBP29.12■■■□□ 2.25
SSBP4-203ENST00000593641 SPEF2Q9C093 1822 aa29.12■■■□□ 2.25
SSBP4-203ENST00000593641 XDHP47989 1333 aa29.12■■■□□ 2.25
SSBP4-203ENST00000593641 PI4KAP2A4QPH2 592 aa29.11■■■□□ 2.25
SSBP4-203ENST00000593641 PI4KAP1Q8N8J0 262 aa29.11■■■□□ 2.25
SSBP4-203ENST00000593641 ABHD8Q96I13 439 aa29.11■■■□□ 2.25
SSBP4-203ENST00000593641 CDC5LQ99459 802 aaKnown RBP29.11■■■□□ 2.25
SSBP4-203ENST00000593641 TSKSQ9UJT2 592 aa29.11■■■□□ 2.25
SSBP4-203ENST00000593641 CTSWP56202 376 aa29.1■■■□□ 2.25
SSBP4-203ENST00000593641 NOGQ13253 232 aa29.1■■■□□ 2.25
SSBP4-203ENST00000593641 CASP8AP2Q9UKL3 1982 aa29.1■■■□□ 2.25
SSBP4-203ENST00000593641 ADM5C9JUS6 153 aa29.09■■■□□ 2.25
SSBP4-203ENST00000593641 ATP2B4P23634 1241 aa29.09■■■□□ 2.25
SSBP4-203ENST00000593641 DLK2Q6UY11 383 aa29.09■■■□□ 2.25
SSBP4-203ENST00000593641 GBA2Q9HCG7 927 aaPredicted RBP29.09■■■□□ 2.25
SSBP4-203ENST00000593641 IGKV5-2P06315 115 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 CCDC27Q2M243 656 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 SULF1Q8IWU6 871 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 C2orf69Q8N8R5 385 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 GGA3Q9NZ52 723 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 ZNF609O15014 1411 aa29.08■■■□□ 2.25
SSBP4-203ENST00000593641 CACNA1FO60840 1977 aa29.07■■■□□ 2.24
SSBP4-203ENST00000593641 TWISTNBQ3B726 338 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-203ENST00000593641 RSBN1LQ6PCB5 846 aaPredicted RBP29.07■■■□□ 2.24
SSBP4-203ENST00000593641 AGBL3Q8NEM8 1001 aa29.07■■■□□ 2.24
SSBP4-203ENST00000593641 RGMBQ6NW40 437 aa29.05■■■□□ 2.24
SSBP4-203ENST00000593641 WWC1Q8IX03 1113 aa29.05■■■□□ 2.24
SSBP4-203ENST00000593641 CWF19L2Q2TBE0 894 aaKnown RBP29.04■■■□□ 2.24
SSBP4-203ENST00000593641 PODNQ7Z5L7 613 aa29.04■■■□□ 2.24
SSBP4-203ENST00000593641 TTLL11Q8NHH1 800 aa29.04■■■□□ 2.24
SSBP4-203ENST00000593641 NEURL1BA8MQ27 555 aa29.03■■■□□ 2.24
SSBP4-203ENST00000593641 ZNF280AP59817 542 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-203ENST00000593641 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
SSBP4-203ENST00000593641 GREM2Q9H772 168 aa29.03■■■□□ 2.24
SSBP4-203ENST00000593641 BSDC1Q9NW68 430 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-203ENST00000593641 MED23Q9ULK4 1368 aa29.02■■■□□ 2.24
SSBP4-203ENST00000593641 SLC4A2P04920 1241 aa29.02■■■□□ 2.24
SSBP4-203ENST00000593641 IL16Q14005 1332 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 USP17L3A6NCW0 530 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 USP17L4A6NCW7 530 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 USP17L8P0C7I0 530 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 USP17L1Q7RTZ2 530 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 CCDC102AQ96A19 550 aa29.01■■■□□ 2.23
SSBP4-203ENST00000593641 AKAP11Q9UKA4 1901 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 ASTN2O75129 1339 aaPredicted RBP29■■■□□ 2.23
SSBP4-203ENST00000593641 ZNF157P51786 506 aaPredicted RBP29■■■□□ 2.23
SSBP4-203ENST00000593641 SCARF1Q14162 830 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 ANGEL2Q5VTE6 544 aaKnown RBP29■■■□□ 2.23
SSBP4-203ENST00000593641 G2E3Q7L622 706 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 UBE3BQ7Z3V4 1068 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 CDCA5Q96FF9 252 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 ZIC5Q96T25 663 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 MINPP1Q9UNW1 487 aa29■■■□□ 2.23
SSBP4-203ENST00000593641 MYOZ2Q9NPC6 264 aa28.99■■■□□ 2.23
SSBP4-203ENST00000593641 IGHMBP2P38935 993 aaKnown RBP28.98■■■□□ 2.23
SSBP4-203ENST00000593641 CCT4P50991 539 aaKnown RBP28.98■■■□□ 2.23
SSBP4-203ENST00000593641 GMLQ99445 158 aa28.98■■■□□ 2.23
SSBP4-203ENST00000593641 CCDC85CA6NKD9 419 aa28.97■■■□□ 2.23
SSBP4-203ENST00000593641 FAM155AB1AL88 458 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms