RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
SRRM1-221ENST00000593639 MOB2Q70IA6 237 aa12.11□□□□□ -0.47
SRRM1-221ENST00000593639 TBC1D16Q8TBP0 767 aa12.11□□□□□ -0.47
SRRM1-221ENST00000593639 ZNF280AP59817 542 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-221ENST00000593639 SCARF1Q14162 830 aa12.1□□□□□ -0.47
SRRM1-221ENST00000593639 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
SRRM1-221ENST00000593639 EYA3Q99504 573 aa12.1□□□□□ -0.47
SRRM1-221ENST00000593639 HDAC9Q9UKV0 1011 aa12.1□□□□□ -0.47
SRRM1-221ENST00000593639 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
SRRM1-221ENST00000593639 BRCA2P51587 3418 aa12.09□□□□□ -0.47
SRRM1-221ENST00000593639 FKBP1BP68106 108 aa12.09□□□□□ -0.47
SRRM1-221ENST00000593639 COL4A1P02462 1669 aa12.09□□□□□ -0.47
SRRM1-221ENST00000593639 CENPFP49454 3210 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
SRRM1-221ENST00000593639 RSBN1LQ6PCB5 846 aaPredicted RBP12.08□□□□□ -0.48
SRRM1-221ENST00000593639 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
SRRM1-221ENST00000593639 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
SRRM1-221ENST00000593639 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
SRRM1-221ENST00000593639 GPR25O00155 361 aa12.07□□□□□ -0.48
SRRM1-221ENST00000593639 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
SRRM1-221ENST00000593639 PRAMEF18Q5VWM3 479 aa12.07□□□□□ -0.48
SRRM1-221ENST00000593639 FBXO46Q6PJ61 603 aaPredicted RBP12.07□□□□□ -0.48
SRRM1-221ENST00000593639 PODXL2Q9NZ53 605 aa12.07□□□□□ -0.48
SRRM1-221ENST00000593639 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
SRRM1-221ENST00000593639 ZNF609O15014 1411 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 IRS4O14654 1257 aaPredicted RBP12.06□□□□□ -0.48
SRRM1-221ENST00000593639 UFL1O94874 794 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 TM4SF4P48230 202 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
SRRM1-221ENST00000593639 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 GMLQ99445 158 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 R3HDMLQ9H3Y0 253 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 MYOZ2Q9NPC6 264 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
SRRM1-221ENST00000593639 LAMB2P55268 1798 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 G3V3G9 751 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 RIPK4P57078 832 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 NOM1Q5C9Z4 860 aaKnown RBP12.05□□□□□ -0.48
SRRM1-221ENST00000593639 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
SRRM1-221ENST00000593639 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
SRRM1-221ENST00000593639 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
SRRM1-221ENST00000593639 GGA1Q9UJY5 639 aa12.04□□□□□ -0.48
SRRM1-221ENST00000593639 TAF1P21675 1872 aa12.04□□□□□ -0.48
SRRM1-221ENST00000593639 PAPPA2Q9BXP8 1791 aa12.03□□□□□ -0.48
SRRM1-221ENST00000593639 FKTNO75072 461 aa12.03□□□□□ -0.48
SRRM1-221ENST00000593639 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-221ENST00000593639 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
SRRM1-221ENST00000593639 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
SRRM1-221ENST00000593639 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 TMPOP42166 694 aaKnown RBP12.02□□□□□ -0.49
SRRM1-221ENST00000593639 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
SRRM1-221ENST00000593639 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 CFHR5Q9BXR6 569 aa12.02□□□□□ -0.49
SRRM1-221ENST00000593639 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-221ENST00000593639 CHL1O00533 1208 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
SRRM1-221ENST00000593639 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-221ENST00000593639 SZT2Q5T011 3432 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
SRRM1-221ENST00000593639 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
SRRM1-221ENST00000593639 DDX60Q8IY21 1712 aaKnown RBP12□□□□□ -0.49
SRRM1-221ENST00000593639 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
SRRM1-221ENST00000593639 WNT10BO00744 389 aa12□□□□□ -0.49
SRRM1-221ENST00000593639 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
SRRM1-221ENST00000593639 PODNQ7Z5L7 613 aa12□□□□□ -0.49
SRRM1-221ENST00000593639 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
SRRM1-221ENST00000593639 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
SRRM1-221ENST00000593639 XDHP47989 1333 aa12□□□□□ -0.49
SRRM1-221ENST00000593639 SASH1O94885 1247 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 NF2P35240 595 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 FXR1P51114 621 aaKnown RBP eCLIP11.99□□□□□ -0.49
SRRM1-221ENST00000593639 PRKG1Q13976 671 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 CCDC152Q4G0S7 254 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 SPRYD7Q5W111 196 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 OTOP1Q7RTM1 612 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 JARID2Q92833 1246 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-221ENST00000593639 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
SRRM1-221ENST00000593639 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
SRRM1-221ENST00000593639 HOXB7P09629 217 aa11.98□□□□□ -0.49
SRRM1-221ENST00000593639 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms