RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 HHIPL1Q96JK4 782 aa22.66■■□□□ 1.22
RETREG3-212ENST00000593251 MYD88Q99836 296 aa22.66■■□□□ 1.22
RETREG3-212ENST00000593251 APAF1O14727 1248 aa22.65■■□□□ 1.22
RETREG3-212ENST00000593251 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
RETREG3-212ENST00000593251 EYA3Q99504 573 aa22.65■■□□□ 1.22
RETREG3-212ENST00000593251 SPEF2Q9C093 1822 aa22.65■■□□□ 1.22
RETREG3-212ENST00000593251 PSME4Q14997 1843 aa22.64■■□□□ 1.22
RETREG3-212ENST00000593251 ZBTB38Q8NAP3 1195 aaPredicted RBP22.64■■□□□ 1.21
RETREG3-212ENST00000593251 ZIC5Q96T25 663 aa22.64■■□□□ 1.21
RETREG3-212ENST00000593251 HUNKP57058 714 aa22.63■■□□□ 1.21
RETREG3-212ENST00000593251 KRT26Q7Z3Y9 468 aa22.63■■□□□ 1.21
RETREG3-212ENST00000593251 CCDC85AQ96PX6 553 aaPredicted RBP22.63■■□□□ 1.21
RETREG3-212ENST00000593251 PRKRIP1Q9H875 184 aaPredicted RBP22.63■■□□□ 1.21
RETREG3-212ENST00000593251 IFT57Q9NWB7 429 aa22.63■■□□□ 1.21
RETREG3-212ENST00000593251 ADM5C9JUS6 153 aa22.62■■□□□ 1.21
RETREG3-212ENST00000593251 UFL1O94874 794 aa22.62■■□□□ 1.21
RETREG3-212ENST00000593251 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
RETREG3-212ENST00000593251 BRPF1P55201 1214 aaPredicted RBP22.62■■□□□ 1.21
RETREG3-212ENST00000593251 GNAI1P63096 354 aa22.62■■□□□ 1.21
RETREG3-212ENST00000593251 ZC3H12CQ9C0D7 883 aaKnown RBP22.62■■□□□ 1.21
RETREG3-212ENST00000593251 MYH3P11055 1940 aa22.61■■□□□ 1.21
RETREG3-212ENST00000593251 CCDC85CA6NKD9 419 aa22.61■■□□□ 1.21
RETREG3-212ENST00000593251 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
RETREG3-212ENST00000593251 ANKIB1Q9P2G1 1089 aa22.61■■□□□ 1.21
RETREG3-212ENST00000593251 DCPSQ96C86 337 aaKnown RBP22.6■■□□□ 1.21
RETREG3-212ENST00000593251 PODXL2Q9NZ53 605 aa22.6■■□□□ 1.21
RETREG3-212ENST00000593251 ASTN2O75129 1339 aaPredicted RBP22.59■■□□□ 1.21
RETREG3-212ENST00000593251 G3V3G9 751 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 CA12O43570 354 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 PCCAP05165 728 aaPredicted RBP22.59■■□□□ 1.21
RETREG3-212ENST00000593251 KIF4BQ2VIQ3 1234 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 DCAF8Q5TAQ9 597 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 CCDC191Q8NCU4 936 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 GBA2Q9HCG7 927 aaPredicted RBP22.59■■□□□ 1.21
RETREG3-212ENST00000593251 GGA1Q9UJY5 639 aa22.59■■□□□ 1.21
RETREG3-212ENST00000593251 PDE8AO60658 829 aa22.58■■□□□ 1.21
RETREG3-212ENST00000593251 VIL1P09327 827 aaKnown RBP22.58■■□□□ 1.21
RETREG3-212ENST00000593251 NOGQ13253 232 aa22.58■■□□□ 1.21
RETREG3-212ENST00000593251 FAM161AQ3B820 660 aa22.58■■□□□ 1.21
RETREG3-212ENST00000593251 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
RETREG3-212ENST00000593251 CWC25Q9NXE8 425 aaPredicted RBP22.58■■□□□ 1.21
RETREG3-212ENST00000593251 AKAP11Q9UKA4 1901 aa22.57■■□□□ 1.2
RETREG3-212ENST00000593251 HSP90B1P14625 803 aaKnown RBP22.57■■□□□ 1.2
RETREG3-212ENST00000593251 RGMBQ6NW40 437 aa22.57■■□□□ 1.2
RETREG3-212ENST00000593251 METTL22Q9BUU2 404 aaPredicted RBP22.57■■□□□ 1.2
RETREG3-212ENST00000593251 GGA3Q9NZ52 723 aa22.57■■□□□ 1.2
RETREG3-212ENST00000593251 CALD1Q05682 793 aaKnown RBP22.56■■□□□ 1.2
RETREG3-212ENST00000593251 C2orf69Q8N8R5 385 aa22.56■■□□□ 1.2
RETREG3-212ENST00000593251 MCOLN1Q9GZU1 580 aa22.56■■□□□ 1.2
RETREG3-212ENST00000593251 FAM155AB1AL88 458 aaPredicted RBP22.55■■□□□ 1.2
RETREG3-212ENST00000593251 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
RETREG3-212ENST00000593251 MAP3K2Q9Y2U5 619 aa22.55■■□□□ 1.2
RETREG3-212ENST00000593251 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
RETREG3-212ENST00000593251 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
RETREG3-212ENST00000593251 ZNF646O15015 1829 aaPredicted RBP22.54■■□□□ 1.2
RETREG3-212ENST00000593251 WTIPA6NIX2 430 aaPredicted RBP22.53■■□□□ 1.2
RETREG3-212ENST00000593251 DDX58O95786 925 aaKnown RBP22.53■■□□□ 1.2
RETREG3-212ENST00000593251 ZNF157P51786 506 aaPredicted RBP22.53■■□□□ 1.2
RETREG3-212ENST00000593251 DGKZQ13574 1117 aa22.53■■□□□ 1.2
RETREG3-212ENST00000593251 RSBN1LQ6PCB5 846 aaPredicted RBP22.53■■□□□ 1.2
RETREG3-212ENST00000593251 SULF1Q8IWU6 871 aa22.53■■□□□ 1.2
RETREG3-212ENST00000593251 XDHP47989 1333 aa22.53■■□□□ 1.2
RETREG3-212ENST00000593251 KIF23Q02241 960 aaPredicted RBP22.52■■□□□ 1.2
RETREG3-212ENST00000593251 SCARF1Q14162 830 aa22.52■■□□□ 1.2
RETREG3-212ENST00000593251 TSR2Q969E8 191 aaKnown RBP22.52■■□□□ 1.2
RETREG3-212ENST00000593251 CDCA5Q96FF9 252 aa22.52■■□□□ 1.2
RETREG3-212ENST00000593251 IGKV5-2P06315 115 aa22.51■■□□□ 1.19
RETREG3-212ENST00000593251 ZNF280AP59817 542 aaPredicted RBP22.51■■□□□ 1.19
RETREG3-212ENST00000593251 ANGEL2Q5VTE6 544 aaKnown RBP22.51■■□□□ 1.19
RETREG3-212ENST00000593251 AGBL3Q8NEM8 1001 aa22.51■■□□□ 1.19
RETREG3-212ENST00000593251 ZNF609O15014 1411 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 ATP2B4P23634 1241 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 CTSWP56202 376 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 CCDC102AQ96A19 550 aa22.5■■□□□ 1.19
RETREG3-212ENST00000593251 SCAF8Q9UPN6 1271 aaKnown RBP22.5■■□□□ 1.19
RETREG3-212ENST00000593251 CWF19L2Q2TBE0 894 aaKnown RBP22.49■■□□□ 1.19
RETREG3-212ENST00000593251 GMLQ99445 158 aa22.49■■□□□ 1.19
RETREG3-212ENST00000593251 GREM2Q9H772 168 aa22.49■■□□□ 1.19
RETREG3-212ENST00000593251 MLLT1Q03111 559 aaPredicted RBP22.48■■□□□ 1.19
RETREG3-212ENST00000593251 TTLL11Q8NHH1 800 aa22.48■■□□□ 1.19
RETREG3-212ENST00000593251 CDC5LQ99459 802 aaKnown RBP22.48■■□□□ 1.19
RETREG3-212ENST00000593251 MYOZ2Q9NPC6 264 aa22.48■■□□□ 1.19
RETREG3-212ENST00000593251 USP17L3A6NCW0 530 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 USP17L4A6NCW7 530 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 TRPA1O75762 1119 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 SLC10A3P09131 477 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 CCDC184Q52MB2 194 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 G2E3Q7L622 706 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 USP17L1Q7RTZ2 530 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 MXD3Q9BW11 206 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 MINPP1Q9UNW1 487 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 PAPPA2Q9BXP8 1791 aa22.47■■□□□ 1.19
RETREG3-212ENST00000593251 RGS19P49795 217 aa22.46■■□□□ 1.19
RETREG3-212ENST00000593251 PODNQ7Z5L7 613 aa22.46■■□□□ 1.19
RETREG3-212ENST00000593251 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
RETREG3-212ENST00000593251 CHMP4AQ9BY43 222 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms