RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
VMP1-217ENST00000593168 RHPN1Q8TCX5 695 aa16.61■□□□□ 0.25
VMP1-217ENST00000593168 APBB1O00213 710 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
VMP1-217ENST00000593168 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
VMP1-217ENST00000593168 PDE6BP35913 854 aa16.59■□□□□ 0.25
VMP1-217ENST00000593168 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
VMP1-217ENST00000593168 TTLL11Q8NHH1 800 aa16.59■□□□□ 0.25
VMP1-217ENST00000593168 NYXQ9GZU5 481 aa16.59■□□□□ 0.25
VMP1-217ENST00000593168 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
VMP1-217ENST00000593168 CTSWP56202 376 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 CCDC57Q2TAC2 916 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
VMP1-217ENST00000593168 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
VMP1-217ENST00000593168 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
VMP1-217ENST00000593168 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
VMP1-217ENST00000593168 DDNO94850 711 aaPredicted RBP16.57■□□□□ 0.24
VMP1-217ENST00000593168 KLHDC4Q8TBB5 520 aa16.57■□□□□ 0.24
VMP1-217ENST00000593168 OSBPL3Q9H4L5 887 aa16.57■□□□□ 0.24
VMP1-217ENST00000593168 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
VMP1-217ENST00000593168 SALL3Q9BXA9 1300 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 CIAO1O76071 339 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 SASH1O94885 1247 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
VMP1-217ENST00000593168 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 IL1RAPL2Q9NP60 686 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 MYH3P11055 1940 aa16.56■□□□□ 0.24
VMP1-217ENST00000593168 SCN4AP35499 1836 aa16.55■□□□□ 0.24
VMP1-217ENST00000593168 EYA2O00167 538 aa16.55■□□□□ 0.24
VMP1-217ENST00000593168 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
VMP1-217ENST00000593168 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
VMP1-217ENST00000593168 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
VMP1-217ENST00000593168 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
VMP1-217ENST00000593168 SIL1Q9H173 461 aa16.55■□□□□ 0.24
VMP1-217ENST00000593168 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 GTF2E1P29083 439 aaPredicted RBP16.54■□□□□ 0.24
VMP1-217ENST00000593168 IL15P40933 162 aaPredicted RBP16.54■□□□□ 0.24
VMP1-217ENST00000593168 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
VMP1-217ENST00000593168 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 STYK1Q6J9G0 422 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
VMP1-217ENST00000593168 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
VMP1-217ENST00000593168 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 GREM2Q9H772 168 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
VMP1-217ENST00000593168 SRGNP10124 158 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 ITGA6P23229 1130 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 PDE1AP54750 535 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 CNBD1Q8NA66 436 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 LAMB2P55268 1798 aa16.53■□□□□ 0.24
VMP1-217ENST00000593168 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
VMP1-217ENST00000593168 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 AOX1Q06278 1338 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 PASKQ96RG2 1323 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 FOXN1O15353 648 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 MX1P20591 662 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
VMP1-217ENST00000593168 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
VMP1-217ENST00000593168 ST5P78524 1137 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
VMP1-217ENST00000593168 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
VMP1-217ENST00000593168 NPHP1O15259 732 aa16.5■□□□□ 0.23
VMP1-217ENST00000593168 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
VMP1-217ENST00000593168 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
VMP1-217ENST00000593168 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
VMP1-217ENST00000593168 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
VMP1-217ENST00000593168 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
VMP1-217ENST00000593168 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
VMP1-217ENST00000593168 TTC41PQ6P2S7 1318 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 TFCP2Q12800 502 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 AACSQ86V21 672 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 LDHDQ86WU2 507 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
VMP1-217ENST00000593168 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
VMP1-217ENST00000593168 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
VMP1-217ENST00000593168 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
VMP1-217ENST00000593168 RIC1Q4ADV7 1423 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms