RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
TPM4-216ENST00000592822 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
TPM4-216ENST00000592822 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
TPM4-216ENST00000592822 KLHDC4Q8TBB5 520 aa12.43□□□□□ -0.42
TPM4-216ENST00000592822 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
TPM4-216ENST00000592822 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
TPM4-216ENST00000592822 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
TPM4-216ENST00000592822 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
TPM4-216ENST00000592822 NSFL1CQ9UNZ2 370 aaKnown RBP12.43□□□□□ -0.42
TPM4-216ENST00000592822 LMNB1P20700 586 aa12.42□□□□□ -0.42
TPM4-216ENST00000592822 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
TPM4-216ENST00000592822 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
TPM4-216ENST00000592822 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
TPM4-216ENST00000592822 ZNF277Q9NRM2 450 aaPredicted RBP12.42□□□□□ -0.42
TPM4-216ENST00000592822 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
TPM4-216ENST00000592822 POLLQ9UGP5 575 aa12.42□□□□□ -0.42
TPM4-216ENST00000592822 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
TPM4-216ENST00000592822 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 ATP8B2P98198 1209 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 CHRNDQ07001 517 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 LRRC24Q50LG9 513 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 COL4A5P29400 1685 aa12.41□□□□□ -0.42
TPM4-216ENST00000592822 XDHP47989 1333 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 UFL1O94874 794 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
TPM4-216ENST00000592822 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
TPM4-216ENST00000592822 GPR101Q96P66 508 aaPredicted RBP12.4□□□□□ -0.42
TPM4-216ENST00000592822 CRBNQ96SW2 442 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
TPM4-216ENST00000592822 COPRSQ9NQ92 184 aa12.4□□□□□ -0.42
TPM4-216ENST00000592822 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
TPM4-216ENST00000592822 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.43
TPM4-216ENST00000592822 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 EYA2O00167 538 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 TAF5LO75529 589 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 ATP2B4P23634 1241 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 POLA2Q14181 598 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 AOC3Q16853 763 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 SIL1Q9H173 461 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
TPM4-216ENST00000592822 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 CIAO1O76071 339 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
TPM4-216ENST00000592822 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 SNAP23O00161 211 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 WASHC4Q2M389 1173 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
TPM4-216ENST00000592822 KLRK1P26718 216 aa12.36□□□□□ -0.43
TPM4-216ENST00000592822 METTL24Q5JXM2 366 aa12.36□□□□□ -0.43
TPM4-216ENST00000592822 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
TPM4-216ENST00000592822 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
TPM4-216ENST00000592822 EYA3Q99504 573 aa12.36□□□□□ -0.43
TPM4-216ENST00000592822 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
TPM4-216ENST00000592822 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
TPM4-216ENST00000592822 MED23Q9ULK4 1368 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 PDE8BO95263 885 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 YY1P25490 414 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
TPM4-216ENST00000592822 KCNJ4P48050 445 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
TPM4-216ENST00000592822 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
TPM4-216ENST00000592822 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
TPM4-216ENST00000592822 FZD9O00144 591 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
TPM4-216ENST00000592822 FGFR2P21802 821 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 UBE4AQ14139 1066 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
TPM4-216ENST00000592822 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.34□□□□□ -0.43
TPM4-216ENST00000592822 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
TPM4-216ENST00000592822 SCN9AQ15858 1988 aa12.33□□□□□ -0.44
TPM4-216ENST00000592822 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
TPM4-216ENST00000592822 SASH1O94885 1247 aa12.33□□□□□ -0.44
TPM4-216ENST00000592822 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
TPM4-216ENST00000592822 TFCP2Q12800 502 aa12.33□□□□□ -0.44
TPM4-216ENST00000592822 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
TPM4-216ENST00000592822 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
TPM4-216ENST00000592822 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms