RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GOLGA6L9A6NEM1 432 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 MATR3P43243 847 aaKnown RBP eCLIP14.66□□□□□ -0.06
DNMT1-228ENST00000592705 PBRM1Q86U86 1689 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 SYCP1Q15431 976 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 CEP135Q66GS9 1140 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 CHMLP26374 656 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 NCOA7Q8NI08 942 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 RDXP35241 583 aaKnown RBP14.66□□□□□ -0.06
DNMT1-228ENST00000592705 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
DNMT1-228ENST00000592705 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 BRF1Q92994 677 aa14.66□□□□□ -0.06
DNMT1-228ENST00000592705 IFIT3O14879 490 aaKnown RBP14.65□□□□□ -0.06
DNMT1-228ENST00000592705 TSPYL1Q9H0U9 437 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 UQCRFS1P1P0C7P4 283 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 KIAA0754O94854 1291 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 IARSP41252 1262 aaKnown RBP14.65□□□□□ -0.06
DNMT1-228ENST00000592705 TRAF1Q13077 416 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 ANXA1P04083 346 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
DNMT1-228ENST00000592705 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 CTCFLQ8NI51 663 aaPredicted RBP14.65□□□□□ -0.06
DNMT1-228ENST00000592705 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
DNMT1-228ENST00000592705 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 GRM8O00222 908 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 RANBP6O60518 1105 aaKnown RBP14.64□□□□□ -0.07
DNMT1-228ENST00000592705 ARHGAP27Q6ZUM4 889 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 MCM3P25205 808 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 KIF4BQ2VIQ3 1234 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 ANKRD2Q9GZV1 360 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 BIN1O00499 593 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 AK2P54819 239 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 TCIRG1Q13488 830 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 EAPPQ56P03 285 aaPredicted RBP14.64□□□□□ -0.07
DNMT1-228ENST00000592705 XAGE3Q8WTP9 111 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 HOOK2Q96ED9 719 aa14.64□□□□□ -0.07
DNMT1-228ENST00000592705 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
DNMT1-228ENST00000592705 ZNF830Q96NB3 372 aaPredicted RBP14.64□□□□□ -0.07
DNMT1-228ENST00000592705 SSBP05455 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 KANK3Q6NY19 840 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 NPHP4O75161 1426 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 MAP9Q49MG5 647 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 MCMDC2Q4G0Z9 681 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 CCDC102BQ68D86 513 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 COPS6Q7L5N1 327 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 DACT1Q9NYF0 836 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 RIMBP2O15034 1052 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 SKIDA1Q1XH10 827 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 KCNG4Q8TDN1 519 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 ZFYP08048 801 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 METAP2P50579 478 aaKnown RBP eCLIP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 PDE4BQ07343 736 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 SPA17Q15506 151 aa14.63□□□□□ -0.07
DNMT1-228ENST00000592705 DDX17Q92841 729 aaKnown RBP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 CRNKL1Q9BZJ0 848 aaKnown RBP14.63□□□□□ -0.07
DNMT1-228ENST00000592705 NMIQ13287 307 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-228ENST00000592705 PARP10Q53GL7 1025 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 NIM1KQ8IY84 436 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 PIBF1Q8WXW3 757 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 FKBP15Q5T1M5 1219 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 CCDC186Q7Z3E2 898 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 RAD50Q92878 1312 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 FAM193AP78312 1265 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 KRT24Q2M2I5 525 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 TMEM67Q5HYA8 995 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 JAKMIP3Q5VZ66 844 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 CCDC191Q8NCU4 936 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 PTPRTO14522 1441 aa14.62□□□□□ -0.07
DNMT1-228ENST00000592705 MAP3K5Q99683 1374 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 KDM5CP41229 1560 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
DNMT1-228ENST00000592705 PYM1Q9BRP8 204 aaKnown RBP14.61□□□□□ -0.07
DNMT1-228ENST00000592705 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
DNMT1-228ENST00000592705 YEATS4O95619 227 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 Q6ZUG5 572 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 TAF4BQ92750 862 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 H7C1D1 291 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 LINS1Q8NG48 757 aa14.61□□□□□ -0.07
DNMT1-228ENST00000592705 IL13P35225 146 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 HAND2P61296 217 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 TYRO3Q06418 890 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 CATIPQ7Z7H3 387 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 ARHGEF5Q12774 1597 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 BMS1Q14692 1282 aaKnown RBP14.6□□□□□ -0.07
DNMT1-228ENST00000592705 RUFY3Q7L099 469 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 PLCG2P16885 1265 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 CREB3L3Q68CJ9 461 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 TCEANC2Q96MN5 208 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-228ENST00000592705 SNRKQ9NRH2 765 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 AOX1Q06278 1338 aa14.6□□□□□ -0.07
DNMT1-228ENST00000592705 KLF18A0A0U1RQI7 1052 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms