RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 MINPP1Q9UNW1 487 aa22.78■■□□□ 1.24
SAFB-213ENST00000592555 KLHDC4Q8TBB5 520 aa22.77■■□□□ 1.24
SAFB-213ENST00000592555 C7orf43Q8WVR3 580 aa22.77■■□□□ 1.24
SAFB-213ENST00000592555 CEP126Q9P2H0 1117 aa22.77■■□□□ 1.24
SAFB-213ENST00000592555 PA2G4Q9UQ80 394 aaKnown RBP22.77■■□□□ 1.24
SAFB-213ENST00000592555 ATG9AQ7Z3C6 839 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 RTKN2Q8IZC4 609 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 CCDC136Q96JN2 1154 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 SIL1Q9H173 461 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 PODXL2Q9NZ53 605 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 LRRC24Q50LG9 513 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 CCDC93Q567U6 631 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 METTL24Q5JXM2 366 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 KIF1BPQ96EK5 621 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 AKAP2Q9Y2D5 859 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 LEMD3Q9Y2U8 911 aa22.76■■□□□ 1.23
SAFB-213ENST00000592555 XDHP47989 1333 aa22.75■■□□□ 1.23
SAFB-213ENST00000592555 CHRNDQ07001 517 aa22.75■■□□□ 1.23
SAFB-213ENST00000592555 SMC5Q8IY18 1101 aa22.75■■□□□ 1.23
SAFB-213ENST00000592555 PUS3Q9BZE2 481 aaKnown RBP22.75■■□□□ 1.23
SAFB-213ENST00000592555 GPR108Q9NPR9 543 aa22.75■■□□□ 1.23
SAFB-213ENST00000592555 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
SAFB-213ENST00000592555 BRCA1P38398 1863 aaKnown RBP22.74■■□□□ 1.23
SAFB-213ENST00000592555 PDE8BO95263 885 aa22.74■■□□□ 1.23
SAFB-213ENST00000592555 BCS1LQ9Y276 419 aa22.74■■□□□ 1.23
SAFB-213ENST00000592555 EXOC6BQ9Y2D4 811 aa22.74■■□□□ 1.23
SAFB-213ENST00000592555 IGHDP01880 384 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 ATP2B4P23634 1241 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 CENPQQ7L2Z9 268 aaPredicted RBP22.73■■□□□ 1.23
SAFB-213ENST00000592555 MPNDQ8N594 471 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 SUPT20HQ8NEM7 779 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 LRRCC1Q9C099 1032 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 VPS33BQ9H267 617 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 ANKIB1Q9P2G1 1089 aa22.73■■□□□ 1.23
SAFB-213ENST00000592555 LRRC37AA6NMS7 1700 aa22.72■■□□□ 1.23
SAFB-213ENST00000592555 C21orf2O43822 256 aa22.72■■□□□ 1.23
SAFB-213ENST00000592555 UBE4AQ14139 1066 aa22.72■■□□□ 1.23
SAFB-213ENST00000592555 RHPN1Q8TCX5 695 aa22.72■■□□□ 1.23
SAFB-213ENST00000592555 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
SAFB-213ENST00000592555 SLX4Q8IY92 1834 aa22.71■■□□□ 1.23
SAFB-213ENST00000592555 PUM3Q15397 648 aaKnown RBP22.71■■□□□ 1.23
SAFB-213ENST00000592555 DPP8Q6V1X1 898 aaPredicted RBP22.71■■□□□ 1.23
SAFB-213ENST00000592555 VGLL2Q8N8G2 317 aa22.71■■□□□ 1.23
SAFB-213ENST00000592555 SASH1O94885 1247 aa22.7■■□□□ 1.22
SAFB-213ENST00000592555 CLASRPQ8N2M8 674 aaKnown RBP22.7■■□□□ 1.22
SAFB-213ENST00000592555 PSMD1Q99460 953 aa22.7■■□□□ 1.22
SAFB-213ENST00000592555 RTFDC1Q9BY42 306 aaPredicted RBP22.7■■□□□ 1.22
SAFB-213ENST00000592555 GGA1Q9UJY5 639 aa22.7■■□□□ 1.22
SAFB-213ENST00000592555 TAF1P21675 1872 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 KCNJ4P48050 445 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 GPSM2P81274 684 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 TFCP2Q12800 502 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 LPIN2Q92539 896 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 EYA3Q99504 573 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 COL4A1P02462 1669 aa22.69■■□□□ 1.22
SAFB-213ENST00000592555 LTBP3Q9NS15 1303 aa22.68■■□□□ 1.22
SAFB-213ENST00000592555 C15orf52Q6ZUT6 534 aaKnown RBP22.68■■□□□ 1.22
SAFB-213ENST00000592555 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
SAFB-213ENST00000592555 ZNF804BA4D1E1 1349 aa22.67■■□□□ 1.22
SAFB-213ENST00000592555 GRIN3BO60391 1043 aa22.67■■□□□ 1.22
SAFB-213ENST00000592555 IFIT1P09914 478 aaKnown RBP22.67■■□□□ 1.22
SAFB-213ENST00000592555 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
SAFB-213ENST00000592555 KDM2BQ8NHM5 1336 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 SLC5A1P13866 664 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 FGFR2P21802 821 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 FKBP4Q02790 459 aaKnown RBP eCLIP22.66■■□□□ 1.22
SAFB-213ENST00000592555 ATP2B3Q16720 1220 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 TBC1D16Q8TBP0 767 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 SPEF2Q9C093 1822 aa22.66■■□□□ 1.22
SAFB-213ENST00000592555 TAF5LO75529 589 aa22.65■■□□□ 1.22
SAFB-213ENST00000592555 TNNI3KQ59H18 835 aa22.65■■□□□ 1.22
SAFB-213ENST00000592555 ANKRD45Q5TZF3 282 aa22.65■■□□□ 1.22
SAFB-213ENST00000592555 HELBQ8NG08 1087 aaPredicted RBP22.65■■□□□ 1.22
SAFB-213ENST00000592555 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
SAFB-213ENST00000592555 FPGT-TNNI3KV9GXZ4 949 aa22.65■■□□□ 1.22
SAFB-213ENST00000592555 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 C6orf229H3BNL8 230 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 UFL1O94874 794 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 NUCB1Q02818 461 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 TAOK3Q9H2K8 898 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 CACNA1SQ13698 1873 aa22.64■■□□□ 1.22
SAFB-213ENST00000592555 MED23Q9ULK4 1368 aa22.64■■□□□ 1.21
SAFB-213ENST00000592555 GPR162Q16538 588 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 ZC3H12CQ9C0D7 883 aaKnown RBP22.63■■□□□ 1.21
SAFB-213ENST00000592555 A0A1B0GUL7 405 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 APBB1O00213 710 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 ZBTB22O15209 634 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 WASHC4Q2M389 1173 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 CAVIN4Q5BKX8 364 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 CHD1LQ86WJ1 897 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 POLLQ9UGP5 575 aa22.63■■□□□ 1.21
SAFB-213ENST00000592555 LTBP1Q14766 1721 aa22.62■■□□□ 1.21
SAFB-213ENST00000592555 IFIT2P09913 472 aaKnown RBP22.62■■□□□ 1.21
SAFB-213ENST00000592555 B4GALNT3Q6L9W6 998 aa22.62■■□□□ 1.21
SAFB-213ENST00000592555 OLFM4Q6UX06 510 aa22.62■■□□□ 1.21
SAFB-213ENST00000592555 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
SAFB-213ENST00000592555 ZNF609O15014 1411 aa22.61■■□□□ 1.21
SAFB-213ENST00000592555 NEUROD6Q96NK8 337 aa22.61■■□□□ 1.21
SAFB-213ENST00000592555 IL1RAPL2Q9NP60 686 aa22.61■■□□□ 1.21
SAFB-213ENST00000592555 ARHGAP27Q6ZUM4 889 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms