RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 MBIPQ9NS73 344 aa23.8■■□□□ 1.4
CIRBP-238ENST00000592412 FAM155AB1AL88 458 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-238ENST00000592412 ZNF853P0CG23 659 aa23.79■■□□□ 1.4
CIRBP-238ENST00000592412 RPS12P25398 132 aaKnown RBP23.79■■□□□ 1.4
CIRBP-238ENST00000592412 RPS8P62241 208 aaKnown RBP23.79■■□□□ 1.4
CIRBP-238ENST00000592412 NOGQ13253 232 aa23.79■■□□□ 1.4
CIRBP-238ENST00000592412 KRT26Q7Z3Y9 468 aa23.79■■□□□ 1.4
CIRBP-238ENST00000592412 SEC31BQ9NQW1 1179 aa23.79■■□□□ 1.4
CIRBP-238ENST00000592412 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
CIRBP-238ENST00000592412 PHAXQ9H814 394 aaKnown RBP23.78■■□□□ 1.4
CIRBP-238ENST00000592412 PODXL2Q9NZ53 605 aa23.78■■□□□ 1.4
CIRBP-238ENST00000592412 RBM26Q5T8P6 1007 aaKnown RBP23.77■■□□□ 1.4
CIRBP-238ENST00000592412 EYA3Q99504 573 aa23.77■■□□□ 1.4
CIRBP-238ENST00000592412 ASTN2O75129 1339 aaPredicted RBP23.77■■□□□ 1.4
CIRBP-238ENST00000592412 VIL1P09327 827 aaKnown RBP23.76■■□□□ 1.39
CIRBP-238ENST00000592412 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
CIRBP-238ENST00000592412 RGMBQ6NW40 437 aa23.76■■□□□ 1.39
CIRBP-238ENST00000592412 ZBTB38Q8NAP3 1195 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-238ENST00000592412 GBA2Q9HCG7 927 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-238ENST00000592412 KIF4BQ2VIQ3 1234 aa23.75■■□□□ 1.39
CIRBP-238ENST00000592412 MLLT1Q03111 559 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-238ENST00000592412 RIC3Q7Z5B4 369 aa23.74■■□□□ 1.39
CIRBP-238ENST00000592412 DCPSQ96C86 337 aaKnown RBP23.74■■□□□ 1.39
CIRBP-238ENST00000592412 ZNF609O15014 1411 aa23.74■■□□□ 1.39
CIRBP-238ENST00000592412 MYD88Q99836 296 aa23.73■■□□□ 1.39
CIRBP-238ENST00000592412 GGA3Q9NZ52 723 aa23.73■■□□□ 1.39
CIRBP-238ENST00000592412 PSME4Q14997 1843 aa23.73■■□□□ 1.39
CIRBP-238ENST00000592412 UFL1O94874 794 aa23.72■■□□□ 1.39
CIRBP-238ENST00000592412 DGKZQ13574 1117 aa23.72■■□□□ 1.39
CIRBP-238ENST00000592412 JARID2Q92833 1246 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-238ENST00000592412 ZC3H12CQ9C0D7 883 aaKnown RBP23.72■■□□□ 1.39
CIRBP-238ENST00000592412 ELL2O00472 640 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-238ENST00000592412 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-238ENST00000592412 ZNF280AP59817 542 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-238ENST00000592412 KIF23Q02241 960 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-238ENST00000592412 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
CIRBP-238ENST00000592412 C2orf69Q8N8R5 385 aa23.71■■□□□ 1.39
CIRBP-238ENST00000592412 SLC34A2O95436 690 aa23.7■■□□□ 1.38
CIRBP-238ENST00000592412 CCDC85AQ96PX6 553 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-238ENST00000592412 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
CIRBP-238ENST00000592412 ANKIB1Q9P2G1 1089 aa23.7■■□□□ 1.38
CIRBP-238ENST00000592412 GGA1Q9UJY5 639 aa23.7■■□□□ 1.38
CIRBP-238ENST00000592412 ZNF157P51786 506 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-238ENST00000592412 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 CCDC191Q8NCU4 936 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 CCDC102AQ96A19 550 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 CDCA5Q96FF9 252 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 GMLQ99445 158 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 SAGE1Q9NXZ1 904 aa23.69■■□□□ 1.38
CIRBP-238ENST00000592412 WTIPA6NIX2 430 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-238ENST00000592412 PDE8AO60658 829 aa23.68■■□□□ 1.38
CIRBP-238ENST00000592412 SLC10A3P09131 477 aa23.68■■□□□ 1.38
CIRBP-238ENST00000592412 CCDC152Q4G0S7 254 aa23.68■■□□□ 1.38
CIRBP-238ENST00000592412 RSBN1LQ6PCB5 846 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-238ENST00000592412 APAF1O14727 1248 aa23.67■■□□□ 1.38
CIRBP-238ENST00000592412 ANGEL2Q5VTE6 544 aaKnown RBP23.67■■□□□ 1.38
CIRBP-238ENST00000592412 SULF1Q8IWU6 871 aa23.67■■□□□ 1.38
CIRBP-238ENST00000592412 AGBL3Q8NEM8 1001 aa23.67■■□□□ 1.38
CIRBP-238ENST00000592412 RNF186Q9NXI6 227 aa23.67■■□□□ 1.38
CIRBP-238ENST00000592412 ZNF646O15015 1829 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-238ENST00000592412 SCARF1Q14162 830 aa23.66■■□□□ 1.38
CIRBP-238ENST00000592412 CSRNP1Q96S65 589 aa23.66■■□□□ 1.38
CIRBP-238ENST00000592412 METTL22Q9BUU2 404 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-238ENST00000592412 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-238ENST00000592412 XDHP47989 1333 aa23.65■■□□□ 1.38
CIRBP-238ENST00000592412 TRPA1O75762 1119 aa23.65■■□□□ 1.38
CIRBP-238ENST00000592412 GNAI1P63096 354 aa23.65■■□□□ 1.38
CIRBP-238ENST00000592412 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.37
CIRBP-238ENST00000592412 RASAL3Q86YV0 1011 aa23.64■■□□□ 1.37
CIRBP-238ENST00000592412 PRKRIP1Q9H875 184 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-238ENST00000592412 G3V3G9 751 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 IGKV5-2P06315 115 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 DCAF8Q5TAQ9 597 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 TSPYL6Q8N831 410 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 MYOZ2Q9NPC6 264 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 SCAF8Q9UPN6 1271 aaKnown RBP23.63■■□□□ 1.37
CIRBP-238ENST00000592412 PAPPA2Q9BXP8 1791 aa23.63■■□□□ 1.37
CIRBP-238ENST00000592412 ANKRD18AQ8IVF6 992 aa23.62■■□□□ 1.37
CIRBP-238ENST00000592412 AKAP11Q9UKA4 1901 aa23.62■■□□□ 1.37
CIRBP-238ENST00000592412 USP17L8P0C7I0 530 aa23.61■■□□□ 1.37
CIRBP-238ENST00000592412 CTSWP56202 376 aa23.61■■□□□ 1.37
CIRBP-238ENST00000592412 MAP3K2Q9Y2U5 619 aa23.61■■□□□ 1.37
CIRBP-238ENST00000592412 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
CIRBP-238ENST00000592412 PITPNM2Q9BZ72 1349 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 USP17L3A6NCW0 530 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 USP17L4A6NCW7 530 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 ATP2B4P23634 1241 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 MOB2Q70IA6 237 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 USP17L1Q7RTZ2 530 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 PODNQ7Z5L7 613 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 TTLL11Q8NHH1 800 aa23.6■■□□□ 1.37
CIRBP-238ENST00000592412 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
CIRBP-238ENST00000592412 CCDC30Q5VVM6 783 aa23.59■■□□□ 1.37
CIRBP-238ENST00000592412 MXD3Q9BW11 206 aa23.59■■□□□ 1.37
CIRBP-238ENST00000592412 GREM2Q9H772 168 aa23.59■■□□□ 1.37
CIRBP-238ENST00000592412 MINPP1Q9UNW1 487 aa23.59■■□□□ 1.37
CIRBP-238ENST00000592412 MED23Q9ULK4 1368 aa23.59■■□□□ 1.37
CIRBP-238ENST00000592412 PI4KAP2A4QPH2 592 aa23.58■■□□□ 1.37
CIRBP-238ENST00000592412 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
CIRBP-238ENST00000592412 FKBP1BP68106 108 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms