RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
APOC1-207ENST00000592176 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
APOC1-207ENST00000592176 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
APOC1-207ENST00000592176 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
APOC1-207ENST00000592176 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
APOC1-207ENST00000592176 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
APOC1-207ENST00000592176 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
APOC1-207ENST00000592176 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 SLC10A3P09131 477 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 HSP90B1P14625 803 aaKnown RBP11.92□□□□□ -0.5
APOC1-207ENST00000592176 SCARF1Q14162 830 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 RALBP1Q15311 655 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
APOC1-207ENST00000592176 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 RTL9Q8NET4 1388 aa11.92□□□□□ -0.5
APOC1-207ENST00000592176 UFL1O94874 794 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 HOXB7P09629 217 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 SEC31BQ9NQW1 1179 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
APOC1-207ENST00000592176 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.5
APOC1-207ENST00000592176 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.5
APOC1-207ENST00000592176 SOX10P56693 466 aa11.9□□□□□ -0.5
APOC1-207ENST00000592176 ZNF280AP59817 542 aaPredicted RBP11.9□□□□□ -0.5
APOC1-207ENST00000592176 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
APOC1-207ENST00000592176 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
APOC1-207ENST00000592176 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
APOC1-207ENST00000592176 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.5
APOC1-207ENST00000592176 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
APOC1-207ENST00000592176 FKBP1BP68106 108 aa11.89□□□□□ -0.51
APOC1-207ENST00000592176 CCDC152Q4G0S7 254 aa11.89□□□□□ -0.51
APOC1-207ENST00000592176 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
APOC1-207ENST00000592176 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
APOC1-207ENST00000592176 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 ANKRD36CQ5JPF3 1778 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 RASAL3Q86YV0 1011 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
APOC1-207ENST00000592176 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 PDE8AO60658 829 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
APOC1-207ENST00000592176 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 JARID2Q92833 1246 aaPredicted RBP11.87□□□□□ -0.51
APOC1-207ENST00000592176 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
APOC1-207ENST00000592176 GMLQ99445 158 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 MYD88Q99836 296 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
APOC1-207ENST00000592176 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
APOC1-207ENST00000592176 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
APOC1-207ENST00000592176 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
APOC1-207ENST00000592176 PKN2Q16513 984 aaKnown RBP11.86□□□□□ -0.51
APOC1-207ENST00000592176 ANKRD18AQ8IVF6 992 aa11.86□□□□□ -0.51
APOC1-207ENST00000592176 LAMB2P55268 1798 aa11.86□□□□□ -0.51
APOC1-207ENST00000592176 XDHP47989 1333 aa11.86□□□□□ -0.51
APOC1-207ENST00000592176 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
APOC1-207ENST00000592176 TAF1P21675 1872 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
APOC1-207ENST00000592176 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
APOC1-207ENST00000592176 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 CWC25Q9NXE8 425 aaPredicted RBP11.85□□□□□ -0.51
APOC1-207ENST00000592176 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
APOC1-207ENST00000592176 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
APOC1-207ENST00000592176 TM4SF4P48230 202 aa11.84□□□□□ -0.51
APOC1-207ENST00000592176 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
APOC1-207ENST00000592176 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
APOC1-207ENST00000592176 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
APOC1-207ENST00000592176 MYBBP1AQ9BQG0 1328 aaKnown RBP11.84□□□□□ -0.51
APOC1-207ENST00000592176 WTIPA6NIX2 430 aaPredicted RBP11.83□□□□□ -0.52
APOC1-207ENST00000592176 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
APOC1-207ENST00000592176 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
APOC1-207ENST00000592176 NF2P35240 595 aa11.83□□□□□ -0.52
APOC1-207ENST00000592176 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
APOC1-207ENST00000592176 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
APOC1-207ENST00000592176 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
APOC1-207ENST00000592176 CHMP4AQ9BY43 222 aa11.83□□□□□ -0.52
APOC1-207ENST00000592176 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
APOC1-207ENST00000592176 GPR25O00155 361 aa11.82□□□□□ -0.52
APOC1-207ENST00000592176 GNAI1P63096 354 aa11.82□□□□□ -0.52
APOC1-207ENST00000592176 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
APOC1-207ENST00000592176 BSDC1Q9NW68 430 aaPredicted RBP11.82□□□□□ -0.52
APOC1-207ENST00000592176 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
APOC1-207ENST00000592176 POLR2AP24928 1970 aaKnown RBP11.81□□□□□ -0.52
APOC1-207ENST00000592176 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
APOC1-207ENST00000592176 DDX60Q8IY21 1712 aaKnown RBP11.81□□□□□ -0.52
APOC1-207ENST00000592176 ZNF609O15014 1411 aa11.81□□□□□ -0.52
APOC1-207ENST00000592176 WNT10BO00744 389 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms