RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 MYD88Q99836 296 aa19.33■□□□□ 0.68
ERCC1-214ENST00000592083 FAM155AB1AL88 458 aaPredicted RBP19.32■□□□□ 0.68
ERCC1-214ENST00000592083 EGFRP00533 1210 aa19.32■□□□□ 0.68
ERCC1-214ENST00000592083 SOX10P56693 466 aa19.32■□□□□ 0.68
ERCC1-214ENST00000592083 RBM26Q5T8P6 1007 aaKnown RBP19.32■□□□□ 0.68
ERCC1-214ENST00000592083 DDX60Q8IY21 1712 aaKnown RBP19.31■□□□□ 0.68
ERCC1-214ENST00000592083 KIF23Q02241 960 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-214ENST00000592083 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-214ENST00000592083 TBC1D10BQ4KMP7 808 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-214ENST00000592083 RGMBQ6NW40 437 aa19.31■□□□□ 0.68
ERCC1-214ENST00000592083 DDX46Q7L014 1031 aaKnown RBP19.31■□□□□ 0.68
ERCC1-214ENST00000592083 KCNQ5Q9NR82 932 aa19.31■□□□□ 0.68
ERCC1-214ENST00000592083 PDE4DIPQ5VU43 2346 aa19.31■□□□□ 0.68
ERCC1-214ENST00000592083 IL16Q14005 1332 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 CDHR2Q9BYE9 1310 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 PSMD14O00487 310 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 RIMBP2O15034 1052 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 TRPA1O75762 1119 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 TRIM28Q13263 835 aaKnown RBP19.3■□□□□ 0.68
ERCC1-214ENST00000592083 GRAPQ13588 217 aa19.3■□□□□ 0.68
ERCC1-214ENST00000592083 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-214ENST00000592083 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-214ENST00000592083 ADM5C9JUS6 153 aa19.29■□□□□ 0.68
ERCC1-214ENST00000592083 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
ERCC1-214ENST00000592083 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
ERCC1-214ENST00000592083 KRT26Q7Z3Y9 468 aa19.29■□□□□ 0.68
ERCC1-214ENST00000592083 DBNDD1Q9H9R9 158 aa19.29■□□□□ 0.68
ERCC1-214ENST00000592083 GBA2Q9HCG7 927 aaPredicted RBP19.29■□□□□ 0.68
ERCC1-214ENST00000592083 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
ERCC1-214ENST00000592083 FANCIQ9NVI1 1328 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 DDX58O95786 925 aaKnown RBP19.28■□□□□ 0.68
ERCC1-214ENST00000592083 G2E3Q7L622 706 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 C2orf69Q8N8R5 385 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
ERCC1-214ENST00000592083 AKAP11Q9UKA4 1901 aa19.27■□□□□ 0.68
ERCC1-214ENST00000592083 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
ERCC1-214ENST00000592083 ZNF157P51786 506 aaPredicted RBP19.27■□□□□ 0.68
ERCC1-214ENST00000592083 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
ERCC1-214ENST00000592083 WASHC4Q2M389 1173 aa19.27■□□□□ 0.68
ERCC1-214ENST00000592083 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
ERCC1-214ENST00000592083 DPF2Q92785 391 aa19.27■□□□□ 0.68
ERCC1-214ENST00000592083 METTL22Q9BUU2 404 aaPredicted RBP19.27■□□□□ 0.68
ERCC1-214ENST00000592083 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
ERCC1-214ENST00000592083 NSFL1CQ9UNZ2 370 aaKnown RBP19.27■□□□□ 0.68
ERCC1-214ENST00000592083 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 PI4KAP1Q8N8J0 262 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 ZBTB38Q8NAP3 1195 aaPredicted RBP19.26■□□□□ 0.67
ERCC1-214ENST00000592083 CELF1Q92879 486 aaKnown RBP19.26■□□□□ 0.67
ERCC1-214ENST00000592083 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 CSRNP1Q96S65 589 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 DUOX1Q9NRD9 1551 aa19.26■□□□□ 0.67
ERCC1-214ENST00000592083 COL4A1P02462 1669 aa19.25■□□□□ 0.67
ERCC1-214ENST00000592083 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
ERCC1-214ENST00000592083 CCDC191Q8NCU4 936 aa19.25■□□□□ 0.67
ERCC1-214ENST00000592083 DCPSQ96C86 337 aaKnown RBP19.25■□□□□ 0.67
ERCC1-214ENST00000592083 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
ERCC1-214ENST00000592083 POLLQ9UGP5 575 aa19.25■□□□□ 0.67
ERCC1-214ENST00000592083 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
ERCC1-214ENST00000592083 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
ERCC1-214ENST00000592083 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
ERCC1-214ENST00000592083 VAMP4O75379 141 aa19.23■□□□□ 0.67
ERCC1-214ENST00000592083 PCCAP05165 728 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-214ENST00000592083 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
ERCC1-214ENST00000592083 GPSM2P81274 684 aa19.23■□□□□ 0.67
ERCC1-214ENST00000592083 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
ERCC1-214ENST00000592083 RTL9Q8NET4 1388 aa19.22■□□□□ 0.67
ERCC1-214ENST00000592083 ECE2O60344 883 aa19.22■□□□□ 0.67
ERCC1-214ENST00000592083 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
ERCC1-214ENST00000592083 CWF19L2Q2TBE0 894 aaKnown RBP19.21■□□□□ 0.67
ERCC1-214ENST00000592083 PDE8AO60658 829 aa19.2■□□□□ 0.66
ERCC1-214ENST00000592083 SLC10A3P09131 477 aa19.2■□□□□ 0.66
ERCC1-214ENST00000592083 RPS8P62241 208 aaKnown RBP19.2■□□□□ 0.66
ERCC1-214ENST00000592083 FLIIQ13045 1269 aa19.2■□□□□ 0.66
ERCC1-214ENST00000592083 TMC4Q7Z404 712 aa19.2■□□□□ 0.66
ERCC1-214ENST00000592083 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
ERCC1-214ENST00000592083 SCN9AQ15858 1988 aa19.19■□□□□ 0.66
ERCC1-214ENST00000592083 NEXNQ0ZGT2 675 aa19.19■□□□□ 0.66
ERCC1-214ENST00000592083 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
ERCC1-214ENST00000592083 CDCA5Q96FF9 252 aa19.19■□□□□ 0.66
ERCC1-214ENST00000592083 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
ERCC1-214ENST00000592083 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
ERCC1-214ENST00000592083 RPS12P25398 132 aaKnown RBP19.18■□□□□ 0.66
ERCC1-214ENST00000592083 FKBP5Q13451 457 aaPredicted RBP19.18■□□□□ 0.66
ERCC1-214ENST00000592083 CTU1Q7Z7A3 348 aaKnown RBP19.18■□□□□ 0.66
ERCC1-214ENST00000592083 SULF1Q8IWU6 871 aa19.18■□□□□ 0.66
ERCC1-214ENST00000592083 TBC1D16Q8TBP0 767 aa19.18■□□□□ 0.66
ERCC1-214ENST00000592083 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
ERCC1-214ENST00000592083 GGA3Q9NZ52 723 aa19.18■□□□□ 0.66
ERCC1-214ENST00000592083 SCAF8Q9UPN6 1271 aaKnown RBP19.18■□□□□ 0.66
ERCC1-214ENST00000592083 VIL1P09327 827 aaKnown RBP19.17■□□□□ 0.66
ERCC1-214ENST00000592083 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
ERCC1-214ENST00000592083 SCARF1Q14162 830 aa19.16■□□□□ 0.66
ERCC1-214ENST00000592083 MOB2Q70IA6 237 aa19.16■□□□□ 0.66
ERCC1-214ENST00000592083 EYA3Q99504 573 aa19.16■□□□□ 0.66
ERCC1-214ENST00000592083 HPS5Q9UPZ3 1129 aa19.16■□□□□ 0.66
ERCC1-214ENST00000592083 TBC1D8O95759 1140 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms