RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
ERCC1-213ENST00000592023 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
ERCC1-213ENST00000592023 XDHP47989 1333 aa19.29■□□□□ 0.68
ERCC1-213ENST00000592023 GMPSP49915 693 aaPredicted RBP19.29■□□□□ 0.68
ERCC1-213ENST00000592023 MRPL50Q8N5N7 158 aaKnown RBP19.29■□□□□ 0.68
ERCC1-213ENST00000592023 ECE2O60344 883 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 ITGA6P23229 1130 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 MIER1Q8N108 512 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 GPRC5DQ9NZD1 345 aa19.28■□□□□ 0.68
ERCC1-213ENST00000592023 GRM8O00222 908 aa19.27■□□□□ 0.68
ERCC1-213ENST00000592023 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
ERCC1-213ENST00000592023 TNIP1Q15025 636 aa19.27■□□□□ 0.68
ERCC1-213ENST00000592023 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
ERCC1-213ENST00000592023 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.68
ERCC1-213ENST00000592023 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
ERCC1-213ENST00000592023 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
ERCC1-213ENST00000592023 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
ERCC1-213ENST00000592023 BSDC1Q9NW68 430 aaPredicted RBP19.26■□□□□ 0.67
ERCC1-213ENST00000592023 SCN9AQ15858 1988 aa19.26■□□□□ 0.67
ERCC1-213ENST00000592023 CEP350Q5VT06 3117 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 A0A1B0GUL6 1792 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 G3V3G9 751 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 PSMD14O00487 310 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 ALDH1L1O75891 902 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 CSF1RP07333 972 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 DCAF8Q5TAQ9 597 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 SMC4Q9NTJ3 1288 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 C9orf78Q9NZ63 289 aaPredicted RBP19.25■□□□□ 0.67
ERCC1-213ENST00000592023 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 PTPRCP08575 1304 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
ERCC1-213ENST00000592023 ATP2B4P23634 1241 aa19.24■□□□□ 0.67
ERCC1-213ENST00000592023 FOXO4P98177 505 aa19.24■□□□□ 0.67
ERCC1-213ENST00000592023 USP50Q70EL3 339 aaPredicted RBP19.24■□□□□ 0.67
ERCC1-213ENST00000592023 TRMT2AQ8IZ69 625 aaKnown RBP19.24■□□□□ 0.67
ERCC1-213ENST00000592023 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
ERCC1-213ENST00000592023 ADARB2Q9NS39 739 aaKnown RBP19.24■□□□□ 0.67
ERCC1-213ENST00000592023 ZBTB12Q9Y330 459 aaPredicted RBP19.24■□□□□ 0.67
ERCC1-213ENST00000592023 PSME4Q14997 1843 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 SHTN1A0MZ66 631 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 ANKRD18BA2A2Z9 1011 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 EPHA10Q5JZY3 1008 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 MPHOSPH8Q99549 860 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 KCNQ5Q9NR82 932 aa19.23■□□□□ 0.67
ERCC1-213ENST00000592023 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
ERCC1-213ENST00000592023 WTIPA6NIX2 430 aaPredicted RBP19.22■□□□□ 0.67
ERCC1-213ENST00000592023 ITGBL1O95965 494 aaPredicted RBP19.22■□□□□ 0.67
ERCC1-213ENST00000592023 CCT4P50991 539 aaKnown RBP19.22■□□□□ 0.67
ERCC1-213ENST00000592023 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
ERCC1-213ENST00000592023 ALDH1L2Q3SY69 923 aa19.22■□□□□ 0.67
ERCC1-213ENST00000592023 LMBR1LQ6UX01 489 aa19.22■□□□□ 0.67
ERCC1-213ENST00000592023 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
ERCC1-213ENST00000592023 MICALL2Q8IY33 904 aa19.21■□□□□ 0.67
ERCC1-213ENST00000592023 TRPM4Q8TD43 1214 aa19.21■□□□□ 0.67
ERCC1-213ENST00000592023 CREBZFQ9NS37 354 aa19.21■□□□□ 0.67
ERCC1-213ENST00000592023 SUCLG2Q96I99 432 aa19.2■□□□□ 0.66
ERCC1-213ENST00000592023 CNOT7Q9UIV1 285 aaKnown RBP19.2■□□□□ 0.66
ERCC1-213ENST00000592023 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
ERCC1-213ENST00000592023 NBPF7P0C2Y1 421 aaPredicted RBP19.19■□□□□ 0.66
ERCC1-213ENST00000592023 CHRNDQ07001 517 aa19.19■□□□□ 0.66
ERCC1-213ENST00000592023 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
ERCC1-213ENST00000592023 H7C1D1 291 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 RPS12P25398 132 aaKnown RBP19.18■□□□□ 0.66
ERCC1-213ENST00000592023 CCDC57Q2TAC2 916 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 TAF7LQ5H9L4 462 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 DPF2Q92785 391 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 ZNF594Q96JF6 807 aaPredicted RBP19.18■□□□□ 0.66
ERCC1-213ENST00000592023 LEMD3Q9Y2U8 911 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 ZNF804BA4D1E1 1349 aa19.18■□□□□ 0.66
ERCC1-213ENST00000592023 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
ERCC1-213ENST00000592023 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
ERCC1-213ENST00000592023 KLRK1P26718 216 aa19.17■□□□□ 0.66
ERCC1-213ENST00000592023 KCNJ4P48050 445 aa19.17■□□□□ 0.66
ERCC1-213ENST00000592023 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERCC1-213ENST00000592023 FMR1Q06787 632 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERCC1-213ENST00000592023 MKRN1Q9UHC7 482 aaKnown RBP19.17■□□□□ 0.66
ERCC1-213ENST00000592023 UTYO14607 1347 aa19.17■□□□□ 0.66
ERCC1-213ENST00000592023 TRAF5O00463 557 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 VIL1P09327 827 aaKnown RBP19.16■□□□□ 0.66
ERCC1-213ENST00000592023 HIRAP54198 1017 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-213ENST00000592023 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-213ENST00000592023 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 TXNRD3Q86VQ6 643 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 HELBQ8NG08 1087 aaPredicted RBP19.16■□□□□ 0.66
ERCC1-213ENST00000592023 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 ZNF609O15014 1411 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 TRPM7Q96QT4 1865 aa19.16■□□□□ 0.66
ERCC1-213ENST00000592023 TAF5LO75529 589 aa19.15■□□□□ 0.66
ERCC1-213ENST00000592023 RSBN1LQ6PCB5 846 aaPredicted RBP19.15■□□□□ 0.66
ERCC1-213ENST00000592023 PODNQ7Z5L7 613 aa19.15■□□□□ 0.66
ERCC1-213ENST00000592023 JMYQ8N9B5 988 aa19.15■□□□□ 0.66
ERCC1-213ENST00000592023 FBXW7Q969H0 707 aa19.15■□□□□ 0.66
ERCC1-213ENST00000592023 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
ERCC1-213ENST00000592023 CNNM1Q9NRU3 951 aa19.15■□□□□ 0.66
ERCC1-213ENST00000592023 USP17L3A6NCW0 530 aa19.14■□□□□ 0.65
ERCC1-213ENST00000592023 USP17L4A6NCW7 530 aa19.14■□□□□ 0.65
ERCC1-213ENST00000592023 SNAP23O00161 211 aa19.14■□□□□ 0.65
ERCC1-213ENST00000592023 EGFRP00533 1210 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms