RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 PODXL2Q9NZ53 605 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 SCN4AP35499 1836 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 BEND3Q5T5X7 828 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
CLIP3-205ENST00000592017 ANKRD18AQ8IVF6 992 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 KCNQ5Q9NR82 932 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 PCNTO95613 3336 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
CLIP3-205ENST00000592017 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
CLIP3-205ENST00000592017 EYA3Q99504 573 aa17.65■□□□□ 0.42
CLIP3-205ENST00000592017 ADARB2Q9NS39 739 aaKnown RBP17.65■□□□□ 0.42
CLIP3-205ENST00000592017 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
CLIP3-205ENST00000592017 PTPRCP08575 1304 aa17.65■□□□□ 0.42
CLIP3-205ENST00000592017 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
CLIP3-205ENST00000592017 UFL1O94874 794 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 ZC3H12CQ9C0D7 883 aaKnown RBP17.64■□□□□ 0.41
CLIP3-205ENST00000592017 SRCIN1Q9C0H9 1055 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 GGA1Q9UJY5 639 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
CLIP3-205ENST00000592017 RTL9Q8NET4 1388 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
CLIP3-205ENST00000592017 ADAMTSL1Q8N6G6 1762 aa17.63■□□□□ 0.41
CLIP3-205ENST00000592017 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
CLIP3-205ENST00000592017 PSMD14O00487 310 aa17.63■□□□□ 0.41
CLIP3-205ENST00000592017 ECE2O60344 883 aa17.63■□□□□ 0.41
CLIP3-205ENST00000592017 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
CLIP3-205ENST00000592017 FMR1Q06787 632 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLIP3-205ENST00000592017 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
CLIP3-205ENST00000592017 MKRN1Q9UHC7 482 aaKnown RBP17.63■□□□□ 0.41
CLIP3-205ENST00000592017 TMEM88BA6NKF7 163 aa17.62■□□□□ 0.41
CLIP3-205ENST00000592017 CSF1RP07333 972 aa17.62■□□□□ 0.41
CLIP3-205ENST00000592017 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
CLIP3-205ENST00000592017 CNOT7Q9UIV1 285 aaKnown RBP17.62■□□□□ 0.41
CLIP3-205ENST00000592017 MINPP1Q9UNW1 487 aa17.62■□□□□ 0.41
CLIP3-205ENST00000592017 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
CLIP3-205ENST00000592017 GRM8O00222 908 aa17.61■□□□□ 0.41
CLIP3-205ENST00000592017 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
CLIP3-205ENST00000592017 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
CLIP3-205ENST00000592017 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
CLIP3-205ENST00000592017 C9orf78Q9NZ63 289 aaPredicted RBP17.61■□□□□ 0.41
CLIP3-205ENST00000592017 XDHP47989 1333 aa17.61■□□□□ 0.41
CLIP3-205ENST00000592017 TRAF5O00463 557 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 ATP2B4P23634 1241 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 RARSP54136 660 aaKnown RBP17.6■□□□□ 0.41
CLIP3-205ENST00000592017 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 DPF2Q92785 391 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 PGAP2Q9UHJ9 254 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
CLIP3-205ENST00000592017 ITGA6P23229 1130 aa17.59■□□□□ 0.41
CLIP3-205ENST00000592017 FOXO4P98177 505 aa17.59■□□□□ 0.41
CLIP3-205ENST00000592017 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
CLIP3-205ENST00000592017 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
CLIP3-205ENST00000592017 H7C1D1 291 aa17.58■□□□□ 0.4
CLIP3-205ENST00000592017 VIL1P09327 827 aaKnown RBP17.58■□□□□ 0.4
CLIP3-205ENST00000592017 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
CLIP3-205ENST00000592017 CST9Q5W186 159 aa17.58■□□□□ 0.4
CLIP3-205ENST00000592017 SAMD7Q7Z3H4 446 aa17.58■□□□□ 0.4
CLIP3-205ENST00000592017 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
CLIP3-205ENST00000592017 G3V3G9 751 aa17.57■□□□□ 0.4
CLIP3-205ENST00000592017 EGFRP00533 1210 aa17.57■□□□□ 0.4
CLIP3-205ENST00000592017 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
CLIP3-205ENST00000592017 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
CLIP3-205ENST00000592017 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
CLIP3-205ENST00000592017 ZC3H15Q8WU90 426 aaKnown RBP17.57■□□□□ 0.4
CLIP3-205ENST00000592017 GLIS2Q9BZE0 524 aaPredicted RBP17.57■□□□□ 0.4
CLIP3-205ENST00000592017 VEGFBP49765 207 aa17.56■□□□□ 0.4
CLIP3-205ENST00000592017 CCT4P50991 539 aaKnown RBP17.56■□□□□ 0.4
CLIP3-205ENST00000592017 TBC1D10BQ4KMP7 808 aaPredicted RBP17.56■□□□□ 0.4
CLIP3-205ENST00000592017 API5Q9BZZ5 524 aaKnown RBP17.56■□□□□ 0.4
CLIP3-205ENST00000592017 RASSF10A6NK89 507 aa17.55■□□□□ 0.4
CLIP3-205ENST00000592017 NBPF7P0C2Y1 421 aaPredicted RBP17.55■□□□□ 0.4
CLIP3-205ENST00000592017 HSPA1AP0DMV8 641 aaKnown RBP17.55■□□□□ 0.4
CLIP3-205ENST00000592017 HSPA1BP0DMV9 641 aaKnown RBP17.55■□□□□ 0.4
CLIP3-205ENST00000592017 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
CLIP3-205ENST00000592017 TXNRD3Q86VQ6 643 aa17.55■□□□□ 0.4
CLIP3-205ENST00000592017 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
CLIP3-205ENST00000592017 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
CLIP3-205ENST00000592017 BCAR3O75815 825 aa17.54■□□□□ 0.4
CLIP3-205ENST00000592017 KLRK1P26718 216 aa17.54■□□□□ 0.4
CLIP3-205ENST00000592017 BRPF1P55201 1214 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-205ENST00000592017 RBM26Q5T8P6 1007 aaKnown RBP17.54■□□□□ 0.4
CLIP3-205ENST00000592017 RSBN1LQ6PCB5 846 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-205ENST00000592017 FRAT1Q92837 279 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-205ENST00000592017 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
CLIP3-205ENST00000592017 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
CLIP3-205ENST00000592017 LEMD3Q9Y2U8 911 aa17.54■□□□□ 0.4
CLIP3-205ENST00000592017 IFIT5Q13325 482 aaKnown RBP17.53■□□□□ 0.4
CLIP3-205ENST00000592017 DEFB115Q30KQ5 88 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 DLK2Q6UY11 383 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 PODNQ7Z5L7 613 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 GMLQ99445 158 aa17.53■□□□□ 0.4
CLIP3-205ENST00000592017 ANKRD2Q9GZV1 360 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms