RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 PCNTO95613 3336 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 XDHP47989 1333 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 BCAR3O75815 825 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-227ENST00000591849 KCNJ4P48050 445 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 TNIP1Q15025 636 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 GPC2Q8N158 579 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 TBC1D16Q8TBP0 767 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 POLLQ9UGP5 575 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
BRCA1-227ENST00000591849 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 CIAPIN1Q6FI81 312 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-227ENST00000591849 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
BRCA1-227ENST00000591849 PLIN1O60240 522 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 RAD17O75943 681 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-227ENST00000591849 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-227ENST00000591849 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 DNAJC5GQ8N7S2 189 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
BRCA1-227ENST00000591849 DBNDD1Q9H9R9 158 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
BRCA1-227ENST00000591849 DDX60Q8IY21 1712 aaKnown RBP12.63□□□□□ -0.39
BRCA1-227ENST00000591849 CXCL9Q07325 125 aa12.63□□□□□ -0.39
BRCA1-227ENST00000591849 ATF7IPQ6VMQ6 1270 aa12.63□□□□□ -0.39
BRCA1-227ENST00000591849 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
BRCA1-227ENST00000591849 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
BRCA1-227ENST00000591849 ZNF594Q96JF6 807 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-227ENST00000591849 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
BRCA1-227ENST00000591849 UTYO14607 1347 aa12.62□□□□□ -0.39
BRCA1-227ENST00000591849 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
BRCA1-227ENST00000591849 POTECB2RU33 542 aa12.62□□□□□ -0.39
BRCA1-227ENST00000591849 ECE2O60344 883 aa12.62□□□□□ -0.39
BRCA1-227ENST00000591849 CHRNDQ07001 517 aa12.62□□□□□ -0.39
BRCA1-227ENST00000591849 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
BRCA1-227ENST00000591849 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-227ENST00000591849 L3MBTL3Q96JM7 780 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-227ENST00000591849 LAMB2P55268 1798 aa12.61□□□□□ -0.39
BRCA1-227ENST00000591849 GNAI3P08754 354 aa12.61□□□□□ -0.39
BRCA1-227ENST00000591849 EPHX2P34913 555 aa12.61□□□□□ -0.39
BRCA1-227ENST00000591849 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-227ENST00000591849 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-227ENST00000591849 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
BRCA1-227ENST00000591849 SCN4AP35499 1836 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 H7C1D1 291 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 TAF5LO75529 589 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 TRIM27P14373 513 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 GMPSP49915 693 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-227ENST00000591849 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
BRCA1-227ENST00000591849 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
BRCA1-227ENST00000591849 YDJCA8MPS7 323 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 EPS15P42566 896 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 RABL6Q3YEC7 729 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-227ENST00000591849 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
BRCA1-227ENST00000591849 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
BRCA1-227ENST00000591849 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
BRCA1-227ENST00000591849 PSMD14O00487 310 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 MS4A1P11836 297 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 TAF1P21675 1872 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 PODNQ7Z5L7 613 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
BRCA1-227ENST00000591849 MEIS3Q99687 375 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 PUS3Q9BZE2 481 aaKnown RBP12.58□□□□□ -0.4
BRCA1-227ENST00000591849 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 GPRC5DQ9NZD1 345 aa12.58□□□□□ -0.4
BRCA1-227ENST00000591849 CNOT7Q9UIV1 285 aaKnown RBP12.58□□□□□ -0.4
BRCA1-227ENST00000591849 USP17L3A6NCW0 530 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 USP17L4A6NCW7 530 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-227ENST00000591849 USP50Q70EL3 339 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-227ENST00000591849 USP17L1Q7RTZ2 530 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 KCNQ5Q9NR82 932 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
BRCA1-227ENST00000591849 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-227ENST00000591849 MROH5Q6ZUA9 1318 aa12.57□□□□□ -0.4
BRCA1-227ENST00000591849 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
BRCA1-227ENST00000591849 GNAI2P04899 355 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms