RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-230	ENST00000590638	NPAS4	Q8IUM7	802 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	AFAP1	Q8N556	730 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ZNF280C	Q8ND82	737 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	GIPC2	Q8TF65	315 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	IRX2	Q9BZI1	471 aa	Predicted RBP	11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	SENP2	Q9HC62	589 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	BCS1L	Q9Y276	419 aa		11.13	□□□□□ -0.63
NEDD4L-230	ENST00000590638	PDGFA	P04085	211 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	RPLP1	P05386	114 aa	Known RBP	11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	C8orf34	Q49A92	452 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	EFHC2	Q5JST6	749 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	RIPOR1	Q6ZS17	1223 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ZNF428	Q96B54	188 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ATP7A	Q04656	1500 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	TEX14	Q8IWB6	1497 aa		11.12	□□□□□ -0.63
NEDD4L-230	ENST00000590638	INO80	Q9ULG1	1556 aa	Predicted RBP	11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ZFYVE16	Q7Z3T8	1539 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	TSPOAP1	O95153	1857 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	EPB42	P16452	691 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ARSD	P51689	593 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	EAPP	Q56P03	285 aa	Predicted RBP	11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	BTLA	Q7Z6A9	289 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	C7orf43	Q8WVR3	580 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	KIFC2	Q96AC6	838 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	NUDT16	Q96DE0	195 aa	Known RBP	11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	CEP63	Q96MT8	703 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	MPHOSPH9	Q99550	1183 aa		11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	DENND4B	O75064	1496 aa	Predicted RBP	11.11	□□□□□ -0.63
NEDD4L-230	ENST00000590638	POGZ	Q7Z3K3	1410 aa		11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638	ERBIN	Q96RT1	1412 aa		11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638	RBM47	A0AV96	593 aa	Known RBP	11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638		E9PSI1	815 aa		11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638	PLCB3	Q01970	1234 aa		11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638	KDM5C	P41229	1560 aa		11.1	□□□□□ -0.63
NEDD4L-230	ENST00000590638	KIDINS220	Q9ULH0	1771 aa		11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	PPRC1	Q5VV67	1664 aa	Known RBP	11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	SOBP	A7XYQ1	873 aa		11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	EHHADH	Q08426	723 aa		11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	CRISPLD1	Q9H336	500 aa		11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	KDM5D	Q9BY66	1539 aa		11.09	□□□□□ -0.63
NEDD4L-230	ENST00000590638	MLH3	Q9UHC1	1453 aa		11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	MAPK8	P45983	427 aa		11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	COL19A1	Q14993	1142 aa		11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	CMTR1	Q8N1G2	835 aa	Known RBP	11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	KLRG1	Q96E93	195 aa		11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	DACH1	Q9UI36	760 aa		11.08	□□□□□ -0.64
NEDD4L-230	ENST00000590638	UNC13B	O14795	1591 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	HECW2	Q9P2P5	1572 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	PZP	P20742	1482 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	RICTOR	Q6R327	1708 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NUP155	O75694	1391 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	TREH	O43280	583 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NLRP8	Q86W28	1048 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	GJD3	Q8N144	294 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	FAM129B	Q96TA1	746 aa		11.07	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NEFL	P07196	543 aa		11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	FGD1	P98174	961 aa		11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	PTS	Q03393	145 aa		11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	FIGNL1	Q6PIW4	674 aa		11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NIF3L1	Q9GZT8	377 aa		11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	DMGDH	Q9UI17	866 aa	Known RBP	11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	RTCB	Q9Y3I0	505 aa	Known RBP	11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.06	□□□□□ -0.64
NEDD4L-230	ENST00000590638	DHX29	Q7Z478	1369 aa	Known RBP	11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638		H7C1W4	665 aa		11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	OPLAH	O14841	1288 aa		11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	P4HB	P07237	508 aa	Known RBP	11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	ZNF16	P17020	682 aa	Predicted RBP	11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	INPP5B	P32019	993 aa		11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	ATP2B2	Q01814	1243 aa		11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	LBR	Q14739	615 aa	Known RBP	11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	USP20	Q9Y2K6	914 aa		11.05	□□□□□ -0.64
NEDD4L-230	ENST00000590638	UBAP1L	F5GYI3	381 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	GPR182	O15218	404 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	RAPGEF3	O95398	923 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NEUROD1	Q13562	356 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	SIN3A	Q96ST3	1273 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	BRD7	Q9NPI1	651 aa		11.04	□□□□□ -0.64
NEDD4L-230	ENST00000590638	IQGAP3	Q86VI3	1631 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	SENP3-EIF4A1	A0A087X0R7	540 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	TYRO3	Q06418	890 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	NUCKS1	Q9H1E3	243 aa	Known RBP	11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	A2M	P01023	1474 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	MAGI2	Q86UL8	1455 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	FAM135A	Q9P2D6	1515 aa		11.03	□□□□□ -0.64
NEDD4L-230	ENST00000590638	ATXN7	O15265	892 aa	Predicted RBP	11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	FMR1	Q06787	632 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638		Q6ZNB5	142 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	ZNF438	Q7Z4V0	828 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	FBXO33	Q7Z6M2	555 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	ALKBH8	Q96BT7	664 aa	Known RBP	11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	TRIM47	Q96LD4	638 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	GGNBP2	Q9H3C7	697 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	ZMYM4	Q5VZL5	1548 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	FRMPD1	Q5SYB0	1578 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	DEPDC5	O75140	1603 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	ANKRD30B	Q9BXX2	1392 aa		11.02	□□□□□ -0.65
NEDD4L-230	ENST00000590638	SLC35F4	A4IF30	521 aa		11.01	□□□□□ -0.65
NEDD4L-230	ENST00000590638	KHNYN	O15037	678 aa	Known RBP	11.01	□□□□□ -0.65

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