RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 CCDC88AQ3V6T2 1871 aa23.49■■□□□ 1.35
MBD1-223ENST00000590215 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
MBD1-223ENST00000590215 GNAI2P04899 355 aa23.47■■□□□ 1.35
MBD1-223ENST00000590215 RFX5P48382 616 aaPredicted RBP23.47■■□□□ 1.35
MBD1-223ENST00000590215 MTX1Q13505 466 aa23.47■■□□□ 1.35
MBD1-223ENST00000590215 POLLQ9UGP5 575 aa23.47■■□□□ 1.35
MBD1-223ENST00000590215 XDHP47989 1333 aa23.47■■□□□ 1.35
MBD1-223ENST00000590215 TBC1D16Q8TBP0 767 aa23.46■■□□□ 1.35
MBD1-223ENST00000590215 ZNF594Q96JF6 807 aaPredicted RBP23.46■■□□□ 1.35
MBD1-223ENST00000590215 KIAA2012Q0VF49 1180 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
MBD1-223ENST00000590215 TAF7LQ5H9L4 462 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 LDHAL6AQ6ZMR3 332 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 ANKRD2Q9GZV1 360 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 GGA1Q9UJY5 639 aa23.45■■□□□ 1.34
MBD1-223ENST00000590215 ATP2B4P23634 1241 aa23.44■■□□□ 1.34
MBD1-223ENST00000590215 C20orf194Q5TEA3 1177 aa23.44■■□□□ 1.34
MBD1-223ENST00000590215 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 PPIP5K2O43314 1243 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 PTPN12Q05209 780 aaKnown RBP23.43■■□□□ 1.34
MBD1-223ENST00000590215 CHRNDQ07001 517 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 LARGE2Q8N3Y3 721 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 DDX19BQ9UMR2 479 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 RIPOR2Q9Y4F9 1068 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 COL4A5P29400 1685 aa23.43■■□□□ 1.34
MBD1-223ENST00000590215 C6orf229H3BNL8 230 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 FZD9O00144 591 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 UFL1O94874 794 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 AOC3Q16853 763 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 JDP2Q8WYK2 163 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 EYA3Q99504 573 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 PUS3Q9BZE2 481 aaKnown RBP23.42■■□□□ 1.34
MBD1-223ENST00000590215 LEMD3Q9Y2U8 911 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 COG6Q9Y2V7 657 aa23.42■■□□□ 1.34
MBD1-223ENST00000590215 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
MBD1-223ENST00000590215 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
MBD1-223ENST00000590215 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
MBD1-223ENST00000590215 FBXO3Q9UK99 471 aa23.41■■□□□ 1.34
MBD1-223ENST00000590215 TIAM2Q8IVF5 1701 aa23.41■■□□□ 1.34
MBD1-223ENST00000590215 KLHDC4Q8TBB5 520 aa23.4■■□□□ 1.34
MBD1-223ENST00000590215 COPRSQ9NQ92 184 aa23.4■■□□□ 1.34
MBD1-223ENST00000590215 GLTPD2A6NH11 291 aa23.39■■□□□ 1.33
MBD1-223ENST00000590215 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
MBD1-223ENST00000590215 ZBTB40Q9NUA8 1239 aa23.39■■□□□ 1.33
MBD1-223ENST00000590215 MROH5Q6ZUA9 1318 aa23.38■■□□□ 1.33
MBD1-223ENST00000590215 WTIPA6NIX2 430 aaPredicted RBP23.38■■□□□ 1.33
MBD1-223ENST00000590215 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
MBD1-223ENST00000590215 LRRC24Q50LG9 513 aa23.38■■□□□ 1.33
MBD1-223ENST00000590215 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
MBD1-223ENST00000590215 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
MBD1-223ENST00000590215 ZNF804BA4D1E1 1349 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 EYA2O00167 538 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 CIAO1O76071 339 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 ATP8B2P98198 1209 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 C15orf52Q6ZUT6 534 aaKnown RBP23.37■■□□□ 1.33
MBD1-223ENST00000590215 GPR101Q96P66 508 aaPredicted RBP23.37■■□□□ 1.33
MBD1-223ENST00000590215 ZNRF3Q9ULT6 936 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 MED23Q9ULK4 1368 aa23.37■■□□□ 1.33
MBD1-223ENST00000590215 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 TAF5LO75529 589 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 POLA2Q14181 598 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 DPY19L2Q6NUT2 758 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 ATG9AQ7Z3C6 839 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 VGLL2Q8N8G2 317 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 HELBQ8NG08 1087 aaPredicted RBP23.36■■□□□ 1.33
MBD1-223ENST00000590215 C1orf115Q9H7X2 142 aa23.36■■□□□ 1.33
MBD1-223ENST00000590215 IRS2Q9Y4H2 1338 aa23.35■■□□□ 1.33
MBD1-223ENST00000590215 A0A1B0GUL6 1792 aa23.35■■□□□ 1.33
MBD1-223ENST00000590215 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
MBD1-223ENST00000590215 SSH3Q8TE77 659 aa23.35■■□□□ 1.33
MBD1-223ENST00000590215 KDM2BQ8NHM5 1336 aa23.34■■□□□ 1.33
MBD1-223ENST00000590215 ZNF541Q9H0D2 1346 aa23.34■■□□□ 1.33
MBD1-223ENST00000590215 UBE4AQ14139 1066 aa23.34■■□□□ 1.33
MBD1-223ENST00000590215 PA2G4Q9UQ80 394 aaKnown RBP23.34■■□□□ 1.33
MBD1-223ENST00000590215 YDJCA8MPS7 323 aa23.33■■□□□ 1.33
MBD1-223ENST00000590215 SNAP23O00161 211 aa23.33■■□□□ 1.33
MBD1-223ENST00000590215 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.33
MBD1-223ENST00000590215 CEP85Q6P2H3 762 aa23.33■■□□□ 1.33
MBD1-223ENST00000590215 TXNRD3Q86VQ6 643 aa23.33■■□□□ 1.33
MBD1-223ENST00000590215 PDE8BO95263 885 aa23.32■■□□□ 1.32
MBD1-223ENST00000590215 IL15P40933 162 aaPredicted RBP23.32■■□□□ 1.32
MBD1-223ENST00000590215 KCNJ4P48050 445 aa23.32■■□□□ 1.32
MBD1-223ENST00000590215 METTL24Q5JXM2 366 aa23.32■■□□□ 1.32
MBD1-223ENST00000590215 GPC2Q8N158 579 aa23.32■■□□□ 1.32
MBD1-223ENST00000590215 L3MBTL3Q96JM7 780 aaPredicted RBP23.32■■□□□ 1.32
MBD1-223ENST00000590215 DBNDD1Q9H9R9 158 aa23.32■■□□□ 1.32
MBD1-223ENST00000590215 GPBP1L1Q9HC44 474 aaPredicted RBP23.32■■□□□ 1.32
MBD1-223ENST00000590215 ECE2O60344 883 aa23.31■■□□□ 1.32
MBD1-223ENST00000590215 DDNO94850 711 aaPredicted RBP23.31■■□□□ 1.32
MBD1-223ENST00000590215 KLRK1P26718 216 aa23.31■■□□□ 1.32
MBD1-223ENST00000590215 CXCL9Q07325 125 aa23.31■■□□□ 1.32
MBD1-223ENST00000590215 DOK7Q18PE1 504 aa23.31■■□□□ 1.32
MBD1-223ENST00000590215 SIL1Q9H173 461 aa23.31■■□□□ 1.32
MBD1-223ENST00000590215 PODNQ7Z5L7 613 aa23.3■■□□□ 1.32
MBD1-223ENST00000590215 RPAP2Q8IXW5 612 aaPredicted RBP23.3■■□□□ 1.32
MBD1-223ENST00000590215 ZNF526Q8TF50 670 aaPredicted RBP23.3■■□□□ 1.32
MBD1-223ENST00000590215 COA1Q9GZY4 146 aa23.3■■□□□ 1.32
MBD1-223ENST00000590215 FGFR2P21802 821 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms