RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ECE2O60344 883 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 MAP2K1Q02750 393 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 NEXNQ0ZGT2 675 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 DOK7Q18PE1 504 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 DCAF8Q5TAQ9 597 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 TRPM4Q8TD43 1214 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 GPR101Q96P66 508 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 CCDC85AQ96PX6 553 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 GLIS2Q9BZE0 524 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 PRDM10Q9NQV6 1147 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 PODXL2Q9NZ53 605 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 CELF2O95319 508 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 GRM1Q13255 1194 aa23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 TLL2Q9Y6L7 1015 aa23.04■■□□□ 1.28
PRKCSH-211ENST00000590098 UFL1O94874 794 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 RPS12P25398 132 aaKnown RBP23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 LBX1P52954 281 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 CYP4F22Q6NT55 531 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 GGA1Q9UJY5 639 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 IL16Q14005 1332 aa23.03■■□□□ 1.28
PRKCSH-211ENST00000590098 ANP32CO43423 234 aa23.02■■□□□ 1.28
PRKCSH-211ENST00000590098 DLK2Q6UY11 383 aa23.02■■□□□ 1.28
PRKCSH-211ENST00000590098 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
PRKCSH-211ENST00000590098 IGKV5-2P06315 115 aa23.01■■□□□ 1.27
PRKCSH-211ENST00000590098 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
PRKCSH-211ENST00000590098 ZNF408Q9H9D4 720 aa23.01■■□□□ 1.27
PRKCSH-211ENST00000590098 MYH3P11055 1940 aa23.01■■□□□ 1.27
PRKCSH-211ENST00000590098 CTSWP56202 376 aa23■■□□□ 1.27
PRKCSH-211ENST00000590098 TBC1D10BQ4KMP7 808 aaPredicted RBP23■■□□□ 1.27
PRKCSH-211ENST00000590098 SAMD7Q7Z3H4 446 aa23■■□□□ 1.27
PRKCSH-211ENST00000590098 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
PRKCSH-211ENST00000590098 EGFRP00533 1210 aa22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 HSPA8P11142 646 aaKnown RBP22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 SAPCD2Q86UD0 394 aa22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 BEGAINQ9BUH8 593 aa22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 XDHP47989 1333 aa22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 RTL9Q8NET4 1388 aa22.99■■□□□ 1.27
PRKCSH-211ENST00000590098 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 POLR2AP24928 1970 aaKnown RBP22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 AOC2O75106 756 aa22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 CWF19L2Q2TBE0 894 aaKnown RBP22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 RBM26Q5T8P6 1007 aaKnown RBP22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 G2E3Q7L622 706 aa22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 USP48Q86UV5 1035 aa22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 SCN9AQ15858 1988 aa22.98■■□□□ 1.27
PRKCSH-211ENST00000590098 NEURL1BA8MQ27 555 aa22.97■■□□□ 1.27
PRKCSH-211ENST00000590098 VIL1P09327 827 aaKnown RBP22.97■■□□□ 1.27
PRKCSH-211ENST00000590098 ATP2B4P23634 1241 aa22.97■■□□□ 1.27
PRKCSH-211ENST00000590098 TTLL11Q8NHH1 800 aa22.97■■□□□ 1.27
PRKCSH-211ENST00000590098 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 MAP2K2P36507 400 aa22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 DCPSQ96C86 337 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 HHIPL1Q96JK4 782 aa22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 SALL2Q9Y467 1007 aaPredicted RBP22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 THSD7BQ9C0I4 1608 aa22.96■■□□□ 1.27
PRKCSH-211ENST00000590098 FLIIQ13045 1269 aa22.95■■□□□ 1.26
PRKCSH-211ENST00000590098 UBE3BQ7Z3V4 1068 aa22.95■■□□□ 1.26
PRKCSH-211ENST00000590098 KRT26Q7Z3Y9 468 aa22.95■■□□□ 1.26
PRKCSH-211ENST00000590098 SPEF2Q9C093 1822 aa22.95■■□□□ 1.26
PRKCSH-211ENST00000590098 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
PRKCSH-211ENST00000590098 WTIPA6NIX2 430 aaPredicted RBP22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 H7C1W4 665 aa22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 FKBP5Q13451 457 aaPredicted RBP22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 KIF4BQ2VIQ3 1234 aa22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 GREM2Q9H772 168 aa22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 BSDC1Q9NW68 430 aaPredicted RBP22.94■■□□□ 1.26
PRKCSH-211ENST00000590098 MYH16Q9H6N6 1097 aa22.93■■□□□ 1.26
PRKCSH-211ENST00000590098 PSME4Q14997 1843 aa22.92■■□□□ 1.26
PRKCSH-211ENST00000590098 GCKRQ14397 625 aa22.92■■□□□ 1.26
PRKCSH-211ENST00000590098 RSBN1LQ6PCB5 846 aaPredicted RBP22.92■■□□□ 1.26
PRKCSH-211ENST00000590098 AGBL3Q8NEM8 1001 aa22.92■■□□□ 1.26
PRKCSH-211ENST00000590098 MINPP1Q9UNW1 487 aa22.92■■□□□ 1.26
PRKCSH-211ENST00000590098 IGHMBP2P38935 993 aaKnown RBP22.91■■□□□ 1.26
PRKCSH-211ENST00000590098 PODNQ7Z5L7 613 aa22.91■■□□□ 1.26
PRKCSH-211ENST00000590098 DNAAF4Q8WXU2 420 aa22.91■■□□□ 1.26
PRKCSH-211ENST00000590098 TSKSQ9UJT2 592 aa22.91■■□□□ 1.26
PRKCSH-211ENST00000590098 USP17L3A6NCW0 530 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 USP17L4A6NCW7 530 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 VAMP4O75379 141 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 HUNKP57058 714 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 USP17L1Q7RTZ2 530 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 SULF1Q8IWU6 871 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 ZIC5Q96T25 663 aa22.9■■□□□ 1.26
PRKCSH-211ENST00000590098 ASTN2O75129 1339 aaPredicted RBP22.89■■□□□ 1.26
PRKCSH-211ENST00000590098 ADM5C9JUS6 153 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 EXOSC9Q06265 439 aaKnown RBP22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 C2orf69Q8N8R5 385 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 LINS1Q8NG48 757 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 GGA3Q9NZ52 723 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 ZNF609O15014 1411 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 MED23Q9ULK4 1368 aa22.89■■□□□ 1.25
PRKCSH-211ENST00000590098 USP17L8P0C7I0 530 aa22.88■■□□□ 1.25
PRKCSH-211ENST00000590098 CCT4P50991 539 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms