RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
RETREG3-209ENST00000590035 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
RETREG3-209ENST00000590035 ABT1Q9ULW3 272 aaKnown RBP13.48□□□□□ -0.25
RETREG3-209ENST00000590035 NSFL1CQ9UNZ2 370 aaKnown RBP13.48□□□□□ -0.25
RETREG3-209ENST00000590035 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-209ENST00000590035 EGFRP00533 1210 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 KCNQ5Q9NR82 932 aa13.47□□□□□ -0.25
RETREG3-209ENST00000590035 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-209ENST00000590035 ECE2O60344 883 aa13.46□□□□□ -0.25
RETREG3-209ENST00000590035 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.25
RETREG3-209ENST00000590035 LBX1P52954 281 aa13.46□□□□□ -0.25
RETREG3-209ENST00000590035 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-209ENST00000590035 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
RETREG3-209ENST00000590035 MYD88Q99836 296 aa13.46□□□□□ -0.25
RETREG3-209ENST00000590035 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
RETREG3-209ENST00000590035 MYH3P11055 1940 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 PDE8AO60658 829 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
RETREG3-209ENST00000590035 VIL1P09327 827 aaKnown RBP13.45□□□□□ -0.26
RETREG3-209ENST00000590035 MAP2K2P36507 400 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 ECE1P42892 770 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 CDC37L1Q7L3B6 337 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 GPR101Q96P66 508 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-209ENST00000590035 EYA3Q99504 573 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
RETREG3-209ENST00000590035 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-209ENST00000590035 IL16Q14005 1332 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
RETREG3-209ENST00000590035 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 GMLQ99445 158 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
RETREG3-209ENST00000590035 C6orf229H3BNL8 230 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 H7C1D1 291 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 AOC2O75106 756 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 ZNF280AP59817 542 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-209ENST00000590035 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 DLK2Q6UY11 383 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
RETREG3-209ENST00000590035 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
RETREG3-209ENST00000590035 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
RETREG3-209ENST00000590035 CTSWP56202 376 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 G2E3Q7L622 706 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
RETREG3-209ENST00000590035 JARID2Q92833 1246 aaPredicted RBP13.42□□□□□ -0.26
RETREG3-209ENST00000590035 XDHP47989 1333 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 WTIPA6NIX2 430 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-209ENST00000590035 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 H7C1W4 665 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 UFL1O94874 794 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-209ENST00000590035 CASP7P55210 303 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-209ENST00000590035 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 ZC3H12CQ9C0D7 883 aaKnown RBP13.41□□□□□ -0.26
RETREG3-209ENST00000590035 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
RETREG3-209ENST00000590035 FAM155AB1AL88 458 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-209ENST00000590035 AGBL3Q8NEM8 1001 aa13.4□□□□□ -0.26
RETREG3-209ENST00000590035 ZIC5Q96T25 663 aa13.4□□□□□ -0.26
RETREG3-209ENST00000590035 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-209ENST00000590035 MED23Q9ULK4 1368 aa13.4□□□□□ -0.26
RETREG3-209ENST00000590035 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-209ENST00000590035 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
RETREG3-209ENST00000590035 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 TWISTNBQ3B726 338 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-209ENST00000590035 RSBN1LQ6PCB5 846 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-209ENST00000590035 KRT26Q7Z3Y9 468 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 GREM2Q9H772 168 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 MINPP1Q9UNW1 487 aa13.39□□□□□ -0.27
RETREG3-209ENST00000590035 ADM5C9JUS6 153 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 CA12O43570 354 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 ABCB7O75027 752 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 PODNQ7Z5L7 613 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-209ENST00000590035 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
RETREG3-209ENST00000590035 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
RETREG3-209ENST00000590035 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
RETREG3-209ENST00000590035 CSF1RP07333 972 aa13.37□□□□□ -0.27
RETREG3-209ENST00000590035 HUNKP57058 714 aa13.37□□□□□ -0.27
RETREG3-209ENST00000590035 FLIIQ13045 1269 aa13.37□□□□□ -0.27
RETREG3-209ENST00000590035 NOGQ13253 232 aa13.37□□□□□ -0.27
RETREG3-209ENST00000590035 GCKRQ14397 625 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms