RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
NEDD4L-227ENST00000590020 SCARF1Q14162 830 aa16.86■□□□□ 0.29
NEDD4L-227ENST00000590020 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
NEDD4L-227ENST00000590020 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
NEDD4L-227ENST00000590020 PPP2R1AP30153 589 aa16.85■□□□□ 0.29
NEDD4L-227ENST00000590020 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
NEDD4L-227ENST00000590020 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
NEDD4L-227ENST00000590020 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
NEDD4L-227ENST00000590020 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 GPR25O00155 361 aa16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 R3HDMLQ9H3Y0 253 aa16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 PAPPA2Q9BXP8 1791 aa16.84■□□□□ 0.29
NEDD4L-227ENST00000590020 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
NEDD4L-227ENST00000590020 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
NEDD4L-227ENST00000590020 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
NEDD4L-227ENST00000590020 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
NEDD4L-227ENST00000590020 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
NEDD4L-227ENST00000590020 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
NEDD4L-227ENST00000590020 HSP90AB3PQ58FF7 597 aa16.81■□□□□ 0.28
NEDD4L-227ENST00000590020 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
NEDD4L-227ENST00000590020 EYA3Q99504 573 aa16.81■□□□□ 0.28
NEDD4L-227ENST00000590020 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
NEDD4L-227ENST00000590020 G3V3G9 751 aa16.8■□□□□ 0.28
NEDD4L-227ENST00000590020 FKBP1BP68106 108 aa16.8■□□□□ 0.28
NEDD4L-227ENST00000590020 TTLL12Q14166 644 aaPredicted RBP16.8■□□□□ 0.28
NEDD4L-227ENST00000590020 DCAF8Q5TAQ9 597 aa16.8■□□□□ 0.28
NEDD4L-227ENST00000590020 MKI67P46013 3256 aaKnown RBP16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 FKTNO75072 461 aa16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 NEFMP07197 916 aa16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 TM4SF4P48230 202 aa16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 ZC3H12CQ9C0D7 883 aaKnown RBP16.79■□□□□ 0.28
NEDD4L-227ENST00000590020 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
NEDD4L-227ENST00000590020 PRKG1Q13976 671 aa16.78■□□□□ 0.28
NEDD4L-227ENST00000590020 RSBN1LQ6PCB5 846 aaPredicted RBP16.78■□□□□ 0.28
NEDD4L-227ENST00000590020 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
NEDD4L-227ENST00000590020 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
NEDD4L-227ENST00000590020 ATP5J2-PTCD1G3V325 749 aa16.77■□□□□ 0.28
NEDD4L-227ENST00000590020 UFL1O94874 794 aa16.77■□□□□ 0.28
NEDD4L-227ENST00000590020 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
NEDD4L-227ENST00000590020 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
NEDD4L-227ENST00000590020 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
NEDD4L-227ENST00000590020 SEC31BQ9NQW1 1179 aa16.76■□□□□ 0.27
NEDD4L-227ENST00000590020 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
NEDD4L-227ENST00000590020 USP17L8P0C7I0 530 aa16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 RPS8P62241 208 aaKnown RBP16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 FZD1Q9UP38 647 aa16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
NEDD4L-227ENST00000590020 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
NEDD4L-227ENST00000590020 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-227ENST00000590020 NOM1Q5C9Z4 860 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-227ENST00000590020 GMLQ99445 158 aa16.74■□□□□ 0.27
NEDD4L-227ENST00000590020 PSME4Q14997 1843 aa16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 EN2P19622 333 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
NEDD4L-227ENST00000590020 HTTP42858 3142 aa16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 WTIPA6NIX2 430 aaPredicted RBP16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 ISCA1Q9BUE6 129 aa16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 PODXL2Q9NZ53 605 aa16.72■□□□□ 0.27
NEDD4L-227ENST00000590020 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
NEDD4L-227ENST00000590020 COLQQ9Y215 455 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-227ENST00000590020 ZNF609O15014 1411 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 CENPFP49454 3210 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 USP17L3A6NCW0 530 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 USP17L4A6NCW7 530 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 USP17L1Q7RTZ2 530 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 CFHR5Q9BXR6 569 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 BRCA2P51587 3418 aa16.7■□□□□ 0.26
NEDD4L-227ENST00000590020 WNT10BO00744 389 aa16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 SASH1O94885 1247 aa16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 NF2P35240 595 aa16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 RBBP6Q7Z6E9 1792 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-227ENST00000590020 RIPK4P57078 832 aa16.68■□□□□ 0.26
NEDD4L-227ENST00000590020 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
NEDD4L-227ENST00000590020 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-227ENST00000590020 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
NEDD4L-227ENST00000590020 CAP1Q01518 475 aa16.67■□□□□ 0.26
NEDD4L-227ENST00000590020 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
NEDD4L-227ENST00000590020 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
NEDD4L-227ENST00000590020 PTPN22Q9Y2R2 807 aa16.67■□□□□ 0.26
NEDD4L-227ENST00000590020 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms