RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
TPM4-211ENST00000589897 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 METTL22Q9BUU2 404 aaPredicted RBP10.64□□□□□ -0.71
TPM4-211ENST00000589897 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 MAP3K2Q9Y2U5 619 aa10.64□□□□□ -0.71
TPM4-211ENST00000589897 ADAMTSL1Q8N6G6 1762 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 PI4KAP2A4QPH2 592 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
TPM4-211ENST00000589897 TNIP1Q15025 636 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 SF3B3Q15393 1217 aaKnown RBP10.63□□□□□ -0.71
TPM4-211ENST00000589897 CCDC152Q4G0S7 254 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 PI4KAP1Q8N8J0 262 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 HDAC9Q9UKV0 1011 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 NSFL1CQ9UNZ2 370 aaKnown RBP10.63□□□□□ -0.71
TPM4-211ENST00000589897 DDX60Q8IY21 1712 aaKnown RBP10.63□□□□□ -0.71
TPM4-211ENST00000589897 TAF1P21675 1872 aa10.63□□□□□ -0.71
TPM4-211ENST00000589897 THSD7BQ9C0I4 1608 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 FAM155AB1AL88 458 aaPredicted RBP10.62□□□□□ -0.71
TPM4-211ENST00000589897 G3V3G9 751 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 H7C1D1 291 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 PDE8AO60658 829 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
TPM4-211ENST00000589897 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
TPM4-211ENST00000589897 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 RTFDC1Q9BY42 306 aaPredicted RBP10.62□□□□□ -0.71
TPM4-211ENST00000589897 MYH16Q9H6N6 1097 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
TPM4-211ENST00000589897 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 SNED1Q8TER0 1413 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
TPM4-211ENST00000589897 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
TPM4-211ENST00000589897 WASHC4Q2M389 1173 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 SLC51AQ86UW1 340 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 JARID2Q92833 1246 aaPredicted RBP10.61□□□□□ -0.71
TPM4-211ENST00000589897 CELF1Q92879 486 aaKnown RBP10.61□□□□□ -0.71
TPM4-211ENST00000589897 EYA3Q99504 573 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 GBA2Q9HCG7 927 aaPredicted RBP10.61□□□□□ -0.71
TPM4-211ENST00000589897 ANKIB1Q9P2G1 1089 aa10.61□□□□□ -0.71
TPM4-211ENST00000589897 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 CACNA1FO60840 1977 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 GMPSP49915 693 aaPredicted RBP10.6□□□□□ -0.71
TPM4-211ENST00000589897 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
TPM4-211ENST00000589897 CXCL9Q07325 125 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 CCDC85AQ96PX6 553 aaPredicted RBP10.6□□□□□ -0.71
TPM4-211ENST00000589897 CSRNP1Q96S65 589 aa10.6□□□□□ -0.71
TPM4-211ENST00000589897 RAD17O75943 681 aa10.59□□□□□ -0.71
TPM4-211ENST00000589897 FLIIQ13045 1269 aa10.59□□□□□ -0.71
TPM4-211ENST00000589897 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
TPM4-211ENST00000589897 ZC3H12CQ9C0D7 883 aaKnown RBP10.59□□□□□ -0.71
TPM4-211ENST00000589897 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
TPM4-211ENST00000589897 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
TPM4-211ENST00000589897 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 COL4A5P29400 1685 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 FXR1P51114 621 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM4-211ENST00000589897 HIRAP54198 1017 aaPredicted RBP10.58□□□□□ -0.72
TPM4-211ENST00000589897 GPSM2P81274 684 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
TPM4-211ENST00000589897 G2E3Q7L622 706 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 UBE3BQ7Z3V4 1068 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 KRT26Q7Z3Y9 468 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
TPM4-211ENST00000589897 DCPSQ96C86 337 aaKnown RBP10.58□□□□□ -0.72
TPM4-211ENST00000589897 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
TPM4-211ENST00000589897 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 VAMP4O75379 141 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 UFL1O94874 794 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 IGKV5-2P06315 115 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 CTSWP56202 376 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 INTS3Q68E01 1043 aaKnown RBP10.57□□□□□ -0.72
TPM4-211ENST00000589897 FBXO46Q6PJ61 603 aaPredicted RBP10.57□□□□□ -0.72
TPM4-211ENST00000589897 DBNDD1Q9H9R9 158 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 GGA1Q9UJY5 639 aa10.57□□□□□ -0.72
TPM4-211ENST00000589897 MYH3P11055 1940 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 LRRC37AA6NMS7 1700 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 DLL1O00548 723 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 SLC10A3P09131 477 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
TPM4-211ENST00000589897 LINS1Q8NG48 757 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 DPF2Q92785 391 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 XDHP47989 1333 aa10.56□□□□□ -0.72
TPM4-211ENST00000589897 ECE2O60344 883 aa10.55□□□□□ -0.72
TPM4-211ENST00000589897 IGHMBP2P38935 993 aaKnown RBP10.55□□□□□ -0.72
TPM4-211ENST00000589897 GCKRQ14397 625 aa10.55□□□□□ -0.72
TPM4-211ENST00000589897 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
TPM4-211ENST00000589897 TRPM4Q8TD43 1214 aa10.55□□□□□ -0.72
TPM4-211ENST00000589897 ZNF296Q8WUU4 475 aaPredicted RBP10.55□□□□□ -0.72
TPM4-211ENST00000589897 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
TPM4-211ENST00000589897 H7C1W4 665 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms