RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
TREM1-204ENST00000589614 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
TREM1-204ENST00000589614 PSMD14O00487 310 aa12.7□□□□□ -0.38
TREM1-204ENST00000589614 NTSR2O95665 410 aa12.7□□□□□ -0.38
TREM1-204ENST00000589614 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
TREM1-204ENST00000589614 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
TREM1-204ENST00000589614 SUSD4Q5VX71 490 aa12.69□□□□□ -0.38
TREM1-204ENST00000589614 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
TREM1-204ENST00000589614 SREBF2Q12772 1141 aa12.68□□□□□ -0.38
TREM1-204ENST00000589614 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
TREM1-204ENST00000589614 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
TREM1-204ENST00000589614 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
TREM1-204ENST00000589614 KNSTRNQ9Y448 316 aa12.68□□□□□ -0.38
TREM1-204ENST00000589614 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 GPTP24298 496 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
TREM1-204ENST00000589614 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 PPP1R42Q7Z4L9 355 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
TREM1-204ENST00000589614 TAF1P21675 1872 aa12.66□□□□□ -0.38
TREM1-204ENST00000589614 ARMC5Q96C12 935 aa12.66□□□□□ -0.38
TREM1-204ENST00000589614 TRIM17Q9Y577 477 aa12.66□□□□□ -0.38
TREM1-204ENST00000589614 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
TREM1-204ENST00000589614 LAMB1P07942 1786 aa12.66□□□□□ -0.38
TREM1-204ENST00000589614 ZNF609O15014 1411 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 STK25O00506 426 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 WASHC4Q2M389 1173 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
TREM1-204ENST00000589614 OTOP1Q7RTM1 612 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
TREM1-204ENST00000589614 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
TREM1-204ENST00000589614 PSME4Q14997 1843 aa12.65□□□□□ -0.39
TREM1-204ENST00000589614 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 EN2P19622 333 aaPredicted RBP12.64□□□□□ -0.39
TREM1-204ENST00000589614 ANGEL2Q5VTE6 544 aaKnown RBP12.64□□□□□ -0.39
TREM1-204ENST00000589614 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
TREM1-204ENST00000589614 ASTN2O75129 1339 aaPredicted RBP12.63□□□□□ -0.39
TREM1-204ENST00000589614 GRAPQ13588 217 aa12.63□□□□□ -0.39
TREM1-204ENST00000589614 NBR1Q14596 966 aa12.63□□□□□ -0.39
TREM1-204ENST00000589614 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
TREM1-204ENST00000589614 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
TREM1-204ENST00000589614 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
TREM1-204ENST00000589614 DBNDD1Q9H9R9 158 aa12.63□□□□□ -0.39
TREM1-204ENST00000589614 H0YGN5 161 aa12.62□□□□□ -0.39
TREM1-204ENST00000589614 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
TREM1-204ENST00000589614 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
TREM1-204ENST00000589614 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
TREM1-204ENST00000589614 ZNF280AP59817 542 aaPredicted RBP12.62□□□□□ -0.39
TREM1-204ENST00000589614 SCARF1Q14162 830 aa12.62□□□□□ -0.39
TREM1-204ENST00000589614 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
TREM1-204ENST00000589614 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
TREM1-204ENST00000589614 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
TREM1-204ENST00000589614 ECE2O60344 883 aa12.61□□□□□ -0.39
TREM1-204ENST00000589614 INHBEP58166 350 aa12.61□□□□□ -0.39
TREM1-204ENST00000589614 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
TREM1-204ENST00000589614 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
TREM1-204ENST00000589614 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
TREM1-204ENST00000589614 KCNQ5Q9NR82 932 aa12.61□□□□□ -0.39
TREM1-204ENST00000589614 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
TREM1-204ENST00000589614 AGBL3Q8NEM8 1001 aa12.6□□□□□ -0.39
TREM1-204ENST00000589614 ERO1AQ96HE7 468 aa12.6□□□□□ -0.39
TREM1-204ENST00000589614 VCANP13611 3396 aa12.6□□□□□ -0.39
TREM1-204ENST00000589614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
TREM1-204ENST00000589614 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
TREM1-204ENST00000589614 TAF7Q15545 349 aaPredicted RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
TREM1-204ENST00000589614 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 EYA3Q99504 573 aa12.59□□□□□ -0.39
TREM1-204ENST00000589614 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
TREM1-204ENST00000589614 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
TREM1-204ENST00000589614 MYL6BP14649 208 aa12.58□□□□□ -0.4
TREM1-204ENST00000589614 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
TREM1-204ENST00000589614 NF2P35240 595 aa12.58□□□□□ -0.4
TREM1-204ENST00000589614 MCM10Q7L590 875 aa12.58□□□□□ -0.4
TREM1-204ENST00000589614 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
TREM1-204ENST00000589614 POLLQ9UGP5 575 aa12.58□□□□□ -0.4
TREM1-204ENST00000589614 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
TREM1-204ENST00000589614 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
TREM1-204ENST00000589614 TTLL12Q14166 644 aaPredicted RBP12.57□□□□□ -0.4
TREM1-204ENST00000589614 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 RSBN1LQ6PCB5 846 aaPredicted RBP12.57□□□□□ -0.4
TREM1-204ENST00000589614 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 EFCC1Q9HA90 598 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
TREM1-204ENST00000589614 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
TREM1-204ENST00000589614 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms