RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 SAGE1Q9NXZ1 904 aa23.44■■□□□ 1.34
CXXC1-211ENST00000589548 KIF4BQ2VIQ3 1234 aa23.43■■□□□ 1.34
CXXC1-211ENST00000589548 RTL5Q5HYW3 569 aaPredicted RBP23.43■■□□□ 1.34
CXXC1-211ENST00000589548 TBC1D16Q8TBP0 767 aa23.43■■□□□ 1.34
CXXC1-211ENST00000589548 RNF186Q9NXI6 227 aa23.43■■□□□ 1.34
CXXC1-211ENST00000589548 ZNF157P51786 506 aaPredicted RBP23.42■■□□□ 1.34
CXXC1-211ENST00000589548 ANKRD13DQ6ZTN6 518 aa23.42■■□□□ 1.34
CXXC1-211ENST00000589548 CCDC102AQ96A19 550 aa23.42■■□□□ 1.34
CXXC1-211ENST00000589548 GGA3Q9NZ52 723 aa23.42■■□□□ 1.34
CXXC1-211ENST00000589548 TRPA1O75762 1119 aa23.41■■□□□ 1.34
CXXC1-211ENST00000589548 SLC10A3P09131 477 aa23.41■■□□□ 1.34
CXXC1-211ENST00000589548 NEUROD2Q15784 382 aa23.41■■□□□ 1.34
CXXC1-211ENST00000589548 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
CXXC1-211ENST00000589548 EYA3Q99504 573 aa23.41■■□□□ 1.34
CXXC1-211ENST00000589548 VIL1P09327 827 aaKnown RBP23.4■■□□□ 1.34
CXXC1-211ENST00000589548 SOX10P56693 466 aa23.4■■□□□ 1.34
CXXC1-211ENST00000589548 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
CXXC1-211ENST00000589548 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
CXXC1-211ENST00000589548 ZNF646O15015 1829 aaPredicted RBP23.4■■□□□ 1.34
CXXC1-211ENST00000589548 PAPPA2Q9BXP8 1791 aa23.4■■□□□ 1.34
CXXC1-211ENST00000589548 IRS4O14654 1257 aaPredicted RBP23.39■■□□□ 1.33
CXXC1-211ENST00000589548 RPS8P62241 208 aaKnown RBP23.39■■□□□ 1.33
CXXC1-211ENST00000589548 CDCA5Q96FF9 252 aa23.39■■□□□ 1.33
CXXC1-211ENST00000589548 CSRNP1Q96S65 589 aa23.39■■□□□ 1.33
CXXC1-211ENST00000589548 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
CXXC1-211ENST00000589548 ZNF609O15014 1411 aa23.39■■□□□ 1.33
CXXC1-211ENST00000589548 SULF1Q8IWU6 871 aa23.38■■□□□ 1.33
CXXC1-211ENST00000589548 SEC31BQ9NQW1 1179 aa23.38■■□□□ 1.33
CXXC1-211ENST00000589548 HOXB7P09629 217 aa23.37■■□□□ 1.33
CXXC1-211ENST00000589548 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
CXXC1-211ENST00000589548 DBF4Q9UBU7 674 aaPredicted RBP23.37■■□□□ 1.33
CXXC1-211ENST00000589548 SPEF2Q9C093 1822 aa23.36■■□□□ 1.33
CXXC1-211ENST00000589548 TRIM28Q13263 835 aaKnown RBP23.36■■□□□ 1.33
CXXC1-211ENST00000589548 RASAL3Q86YV0 1011 aa23.36■■□□□ 1.33
CXXC1-211ENST00000589548 UFL1O94874 794 aa23.35■■□□□ 1.33
CXXC1-211ENST00000589548 ZNF280AP59817 542 aaPredicted RBP23.35■■□□□ 1.33
CXXC1-211ENST00000589548 ZC3H12CQ9C0D7 883 aaKnown RBP23.35■■□□□ 1.33
CXXC1-211ENST00000589548 ANGEL2Q5VTE6 544 aaKnown RBP23.34■■□□□ 1.33
CXXC1-211ENST00000589548 HYPKQ9NX55 129 aa23.34■■□□□ 1.33
CXXC1-211ENST00000589548 SCARF1Q14162 830 aa23.33■■□□□ 1.33
CXXC1-211ENST00000589548 DUSP27Q5VZP5 1158 aa23.33■■□□□ 1.33
CXXC1-211ENST00000589548 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
CXXC1-211ENST00000589548 MYH3P11055 1940 aa23.32■■□□□ 1.32
CXXC1-211ENST00000589548 RALBP1Q15311 655 aa23.32■■□□□ 1.32
CXXC1-211ENST00000589548 CTU1Q7Z7A3 348 aaKnown RBP23.32■■□□□ 1.32
CXXC1-211ENST00000589548 ZBTB38Q8NAP3 1195 aaPredicted RBP23.32■■□□□ 1.32
CXXC1-211ENST00000589548 GMLQ99445 158 aa23.32■■□□□ 1.32
CXXC1-211ENST00000589548 ANKIB1Q9P2G1 1089 aa23.32■■□□□ 1.32
CXXC1-211ENST00000589548 GGA1Q9UJY5 639 aa23.32■■□□□ 1.32
CXXC1-211ENST00000589548 AGBL3Q8NEM8 1001 aa23.31■■□□□ 1.32
CXXC1-211ENST00000589548 SCAF8Q9UPN6 1271 aaKnown RBP23.31■■□□□ 1.32
CXXC1-211ENST00000589548 MOB2Q70IA6 237 aa23.3■■□□□ 1.32
CXXC1-211ENST00000589548 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
CXXC1-211ENST00000589548 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
CXXC1-211ENST00000589548 G3V3G9 751 aa23.29■■□□□ 1.32
CXXC1-211ENST00000589548 DCAF8Q5TAQ9 597 aa23.29■■□□□ 1.32
CXXC1-211ENST00000589548 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
CXXC1-211ENST00000589548 JARID2Q92833 1246 aaPredicted RBP23.29■■□□□ 1.32
CXXC1-211ENST00000589548 MBIPQ9NS73 344 aa23.29■■□□□ 1.32
CXXC1-211ENST00000589548 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-211ENST00000589548 MYOZ2Q9NPC6 264 aa23.28■■□□□ 1.32
CXXC1-211ENST00000589548 PITPNM2Q9BZ72 1349 aa23.28■■□□□ 1.32
CXXC1-211ENST00000589548 WTIPA6NIX2 430 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-211ENST00000589548 FKBP1BP68106 108 aa23.27■■□□□ 1.32
CXXC1-211ENST00000589548 PRPF38BQ5VTL8 546 aaKnown RBP23.27■■□□□ 1.32
CXXC1-211ENST00000589548 REM2Q8IYK8 340 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-211ENST00000589548 MYD88Q99836 296 aa23.27■■□□□ 1.32
CXXC1-211ENST00000589548 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
CXXC1-211ENST00000589548 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
CXXC1-211ENST00000589548 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
CXXC1-211ENST00000589548 CCDC152Q4G0S7 254 aa23.26■■□□□ 1.31
CXXC1-211ENST00000589548 HPS5Q9UPZ3 1129 aa23.26■■□□□ 1.31
CXXC1-211ENST00000589548 XDHP47989 1333 aa23.26■■□□□ 1.31
CXXC1-211ENST00000589548 PDE8AO60658 829 aa23.25■■□□□ 1.31
CXXC1-211ENST00000589548 PRAMEF18Q5VWM3 479 aa23.25■■□□□ 1.31
CXXC1-211ENST00000589548 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
CXXC1-211ENST00000589548 UBE2Q2LH0YL09 131 aa23.24■■□□□ 1.31
CXXC1-211ENST00000589548 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
CXXC1-211ENST00000589548 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
CXXC1-211ENST00000589548 USP17L3A6NCW0 530 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 USP17L4A6NCW7 530 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 TBC1D8O95759 1140 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 NBPF9Q3BBW0 867 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 USP17L1Q7RTZ2 530 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 ZNF296Q8WUU4 475 aaPredicted RBP23.23■■□□□ 1.31
CXXC1-211ENST00000589548 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
CXXC1-211ENST00000589548 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
CXXC1-211ENST00000589548 ATP2B4P23634 1241 aa23.22■■□□□ 1.31
CXXC1-211ENST00000589548 PODNQ7Z5L7 613 aa23.22■■□□□ 1.31
CXXC1-211ENST00000589548 ANKRD18AQ8IVF6 992 aa23.22■■□□□ 1.31
CXXC1-211ENST00000589548 CWC25Q9NXE8 425 aaPredicted RBP23.22■■□□□ 1.31
CXXC1-211ENST00000589548 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
CXXC1-211ENST00000589548 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
CXXC1-211ENST00000589548 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.32e-7■■■■□ 19.5
CXXC1-211ENST00000589548 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
CXXC1-211ENST00000589548 DACT2Q5SW24 774 aa23.19■■□□□ 1.3
CXXC1-211ENST00000589548 TM4SF4P48230 202 aa23.18■■□□□ 1.3
CXXC1-211ENST00000589548 CTSWP56202 376 aa23.18■■□□□ 1.3
CXXC1-211ENST00000589548 MKRN3Q13064 507 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms