RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
DNMT1-219ENST00000589349 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
DNMT1-219ENST00000589349 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
DNMT1-219ENST00000589349 CALR3Q96L12 384 aaKnown RBP11.4□□□□□ -0.58
DNMT1-219ENST00000589349 LZTS3O60299 673 aaPredicted RBP11.39□□□□□ -0.59
DNMT1-219ENST00000589349 APBA3O96018 575 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 COG3Q96JB2 828 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 NLRP2Q9NX02 1062 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
DNMT1-219ENST00000589349 BRWD3Q6RI45 1802 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 CAMTA1Q9Y6Y1 1673 aa11.39□□□□□ -0.59
DNMT1-219ENST00000589349 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 SNRPBP14678 240 aaKnown RBP11.38□□□□□ -0.59
DNMT1-219ENST00000589349 DDB1Q16531 1140 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 OSBPL3Q9H4L5 887 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 AATKQ6ZMQ8 1374 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
DNMT1-219ENST00000589349 CPSF1Q10570 1443 aaKnown RBP11.37□□□□□ -0.59
DNMT1-219ENST00000589349 AMPHP49418 695 aa11.37□□□□□ -0.59
DNMT1-219ENST00000589349 EML3Q32P44 896 aa11.37□□□□□ -0.59
DNMT1-219ENST00000589349 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
DNMT1-219ENST00000589349 TESK2Q96S53 571 aa11.37□□□□□ -0.59
DNMT1-219ENST00000589349 ZNF395Q9H8N7 513 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-219ENST00000589349 TIMELESSQ9UNS1 1208 aa11.37□□□□□ -0.59
DNMT1-219ENST00000589349 CRB1P82279 1406 aa11.36□□□□□ -0.59
DNMT1-219ENST00000589349 CRYBG1Q9Y4K1 1723 aa11.36□□□□□ -0.59
DNMT1-219ENST00000589349 TTLL8A6PVC2 850 aa11.36□□□□□ -0.59
DNMT1-219ENST00000589349 KDF1Q8NAX2 398 aaPredicted RBP11.36□□□□□ -0.59
DNMT1-219ENST00000589349 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
DNMT1-219ENST00000589349 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
DNMT1-219ENST00000589349 COL5A2P05997 1499 aaPredicted RBP11.36□□□□□ -0.59
DNMT1-219ENST00000589349 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 EXOC5O00471 708 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 MAN1A2O60476 641 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 GNRH1P01148 92 aa11.35□□□□□ -0.59
DNMT1-219ENST00000589349 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
DNMT1-219ENST00000589349 INSM2Q96T92 566 aaPredicted RBP11.35□□□□□ -0.59
DNMT1-219ENST00000589349 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
DNMT1-219ENST00000589349 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
DNMT1-219ENST00000589349 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
DNMT1-219ENST00000589349 ATP9BO43861 1147 aa11.34□□□□□ -0.59
DNMT1-219ENST00000589349 EZH2Q15910 746 aaKnown RBP11.34□□□□□ -0.59
DNMT1-219ENST00000589349 ANKRD24Q8TF21 1146 aa11.34□□□□□ -0.59
DNMT1-219ENST00000589349 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
DNMT1-219ENST00000589349 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
DNMT1-219ENST00000589349 NINLQ9Y2I6 1382 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 A0A1W2PRU2 124 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 FBLN1P23142 703 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 TBC1D9Q6ZT07 1266 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 NOD1Q9Y239 953 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 SLIT3O75094 1523 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 AKAP12Q02952 1782 aa11.33□□□□□ -0.6
DNMT1-219ENST00000589349 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
DNMT1-219ENST00000589349 CTSOP43234 321 aaPredicted RBP11.32□□□□□ -0.6
DNMT1-219ENST00000589349 NCOA4Q13772 614 aa11.32□□□□□ -0.6
DNMT1-219ENST00000589349 R3HDM1Q15032 1099 aaKnown RBP11.32□□□□□ -0.6
DNMT1-219ENST00000589349 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.62e-14■■□□□ 12.9
DNMT1-219ENST00000589349 PLEKHM2Q8IWE5 1019 aa11.32□□□□□ -0.6
DNMT1-219ENST00000589349 NLRP3Q96P20 1036 aa11.32□□□□□ -0.6
DNMT1-219ENST00000589349 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
DNMT1-219ENST00000589349 MEN1O00255 615 aa11.31□□□□□ -0.6
DNMT1-219ENST00000589349 CLN3Q13286 438 aa11.31□□□□□ -0.6
DNMT1-219ENST00000589349 CD163L1Q9NR16 1453 aa11.31□□□□□ -0.6
DNMT1-219ENST00000589349 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 GPC1P35052 558 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 RRS1Q15050 365 aaKnown RBP11.3□□□□□ -0.6
DNMT1-219ENST00000589349 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
DNMT1-219ENST00000589349 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
DNMT1-219ENST00000589349 CCDC7Q96M83 1385 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
DNMT1-219ENST00000589349 IL2RBP14784 551 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-219ENST00000589349 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
DNMT1-219ENST00000589349 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 IP6K1Q92551 441 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 ACSBG1Q96GR2 724 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 TFIP11Q9UBB9 837 aaKnown RBP11.29□□□□□ -0.6
DNMT1-219ENST00000589349 THSD7AQ9UPZ6 1657 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
DNMT1-219ENST00000589349 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
DNMT1-219ENST00000589349 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
DNMT1-219ENST00000589349 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
DNMT1-219ENST00000589349 FYB1O15117 783 aa11.28□□□□□ -0.6
DNMT1-219ENST00000589349 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-219ENST00000589349 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
DNMT1-219ENST00000589349 RAB6BQ9NRW1 208 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms