RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SBF1O95248 1867 aa23.66■■□□□ 1.38
CLPTM1-209ENST00000588855 ATP8B2P98198 1209 aa23.65■■□□□ 1.38
CLPTM1-209ENST00000588855 RASSF7Q02833 373 aa23.65■■□□□ 1.38
CLPTM1-209ENST00000588855 PUS3Q9BZE2 481 aaKnown RBP23.65■■□□□ 1.38
CLPTM1-209ENST00000588855 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
CLPTM1-209ENST00000588855 PA2G4Q9UQ80 394 aaKnown RBP23.65■■□□□ 1.38
CLPTM1-209ENST00000588855 GPSM2P81274 684 aa23.64■■□□□ 1.38
CLPTM1-209ENST00000588855 RTKN2Q8IZC4 609 aa23.64■■□□□ 1.38
CLPTM1-209ENST00000588855 CNNM1Q9NRU3 951 aa23.64■■□□□ 1.38
CLPTM1-209ENST00000588855 LRRC24Q50LG9 513 aa23.64■■□□□ 1.37
CLPTM1-209ENST00000588855 EXOC6Q8TAG9 804 aa23.64■■□□□ 1.37
CLPTM1-209ENST00000588855 POLA2Q14181 598 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 DPP8Q6V1X1 898 aaPredicted RBP23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 MPNDQ8N594 471 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 SSH3Q8TE77 659 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 SIL1Q9H173 461 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 TAOK3Q9H2K8 898 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 COPRSQ9NQ92 184 aa23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 NSFL1CQ9UNZ2 370 aaKnown RBP23.63■■□□□ 1.37
CLPTM1-209ENST00000588855 FKBP4Q02790 459 aaKnown RBP eCLIP23.62■■□□□ 1.37
CLPTM1-209ENST00000588855 CHRNDQ07001 517 aa23.62■■□□□ 1.37
CLPTM1-209ENST00000588855 LTBP3Q9NS15 1303 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 GRIPAP1Q4V328 841 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 SIRT2Q8IXJ6 389 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 RPAP2Q8IXW5 612 aaPredicted RBP23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 PSMD1Q99460 953 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 ANKIB1Q9P2G1 1089 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 RIPOR2Q9Y4F9 1068 aa23.61■■□□□ 1.37
CLPTM1-209ENST00000588855 XDHP47989 1333 aa23.6■■□□□ 1.37
CLPTM1-209ENST00000588855 EYA2O00167 538 aa23.6■■□□□ 1.37
CLPTM1-209ENST00000588855 PODXL2Q9NZ53 605 aa23.6■■□□□ 1.37
CLPTM1-209ENST00000588855 CHD4Q14839 1912 aa23.6■■□□□ 1.37
CLPTM1-209ENST00000588855 PRELPP51888 382 aa23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 HELBQ8NG08 1087 aaPredicted RBP23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 ATG9AQ7Z3C6 839 aa23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 RTFDC1Q9BY42 306 aaPredicted RBP23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 ANKRD2Q9GZV1 360 aa23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 POLLQ9UGP5 575 aa23.59■■□□□ 1.37
CLPTM1-209ENST00000588855 TAF5LO75529 589 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 CIAO1O76071 339 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 UFL1O94874 794 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 TBC1D16Q8TBP0 767 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 ZNF277Q9NRM2 450 aaPredicted RBP23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 GGA1Q9UJY5 639 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 FBXO3Q9UK99 471 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 PCDHB15Q9Y5E8 787 aa23.58■■□□□ 1.36
CLPTM1-209ENST00000588855 MROH5Q6ZUA9 1318 aa23.57■■□□□ 1.36
CLPTM1-209ENST00000588855 TIAM2Q8IVF5 1701 aa23.57■■□□□ 1.36
CLPTM1-209ENST00000588855 WTIPA6NIX2 430 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-209ENST00000588855 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
CLPTM1-209ENST00000588855 C6orf229H3BNL8 230 aa23.56■■□□□ 1.36
CLPTM1-209ENST00000588855 COL4A5P29400 1685 aa23.56■■□□□ 1.36
CLPTM1-209ENST00000588855 SNAP23O00161 211 aa23.55■■□□□ 1.36
CLPTM1-209ENST00000588855 HMMRO75330 724 aa23.55■■□□□ 1.36
CLPTM1-209ENST00000588855 ATP2B4P23634 1241 aa23.55■■□□□ 1.36
CLPTM1-209ENST00000588855 VGLL2Q8N8G2 317 aa23.55■■□□□ 1.36
CLPTM1-209ENST00000588855 SUPT20HQ8NEM7 779 aa23.55■■□□□ 1.36
CLPTM1-209ENST00000588855 LMNB1P20700 586 aa23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 IL15P40933 162 aaPredicted RBP23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 AAMPQ13685 434 aa23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 SURF6O75683 361 aaKnown RBP23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 IARSP41252 1262 aaKnown RBP23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 LEMD3Q9Y2U8 911 aa23.54■■□□□ 1.36
CLPTM1-209ENST00000588855 ZNF804BA4D1E1 1349 aa23.53■■□□□ 1.36
CLPTM1-209ENST00000588855 G3BP1Q13283 466 aaKnown RBP eCLIP23.53■■□□□ 1.36
CLPTM1-209ENST00000588855 AOC3Q16853 763 aa23.53■■□□□ 1.36
CLPTM1-209ENST00000588855 RNF181Q9P0P0 153 aa23.53■■□□□ 1.36
CLPTM1-209ENST00000588855 NOP58Q9Y2X3 529 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-209ENST00000588855 PPIP5K2O43314 1243 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 PDE8BO95263 885 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 KCNJ4P48050 445 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 C9orf131Q5VYM1 1079 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 EYA3Q99504 573 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 EXOC6BQ9Y2D4 811 aa23.52■■□□□ 1.36
CLPTM1-209ENST00000588855 RIMBP2O15034 1052 aa23.51■■□□□ 1.35
CLPTM1-209ENST00000588855 KLRK1P26718 216 aa23.51■■□□□ 1.35
CLPTM1-209ENST00000588855 KIAA2012Q0VF49 1180 aa23.51■■□□□ 1.35
CLPTM1-209ENST00000588855 WASHC4Q2M389 1173 aa23.51■■□□□ 1.35
CLPTM1-209ENST00000588855 MED23Q9ULK4 1368 aa23.51■■□□□ 1.35
CLPTM1-209ENST00000588855 OS9Q13438 667 aaPredicted RBP23.5■■□□□ 1.35
CLPTM1-209ENST00000588855 LARGE2Q8N3Y3 721 aa23.5■■□□□ 1.35
CLPTM1-209ENST00000588855 CEP126Q9P2H0 1117 aa23.5■■□□□ 1.35
CLPTM1-209ENST00000588855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.5■■□□□ 1.35
CLPTM1-209ENST00000588855 ARAP2Q8WZ64 1704 aa23.5■■□□□ 1.35
CLPTM1-209ENST00000588855 SASH1O94885 1247 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 TFCP2Q12800 502 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 IRS2Q9Y4H2 1338 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 UBE4AQ14139 1066 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 TXNRD3Q86VQ6 643 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 VPS33BQ9H267 617 aa23.49■■□□□ 1.35
CLPTM1-209ENST00000588855 PUM3Q15397 648 aaKnown RBP23.48■■□□□ 1.35
CLPTM1-209ENST00000588855 FGFR2P21802 821 aa23.47■■□□□ 1.35
CLPTM1-209ENST00000588855 ZNF609O15014 1411 aa23.46■■□□□ 1.35
CLPTM1-209ENST00000588855 SCN9AQ15858 1988 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 DOK7Q18PE1 504 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 HSP90AB4PQ58FF6 505 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms