RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 TBC1D16Q8TBP0 767 aa18.87■□□□□ 0.61
NFIC-205ENST00000588839 CDC5LQ99459 802 aaKnown RBP18.87■□□□□ 0.61
NFIC-205ENST00000588839 DBNDD1Q9H9R9 158 aa18.87■□□□□ 0.61
NFIC-205ENST00000588839 RASSF10A6NK89 507 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 ECE2O60344 883 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 UFL1O94874 794 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 IGKV5-2P06315 115 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 CTSWP56202 376 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 ZC3H15Q8WU90 426 aaKnown RBP18.86■□□□□ 0.61
NFIC-205ENST00000588839 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
NFIC-205ENST00000588839 CCDC85AQ96PX6 553 aaPredicted RBP18.86■□□□□ 0.61
NFIC-205ENST00000588839 CNOT7Q9UIV1 285 aaKnown RBP18.86■□□□□ 0.61
NFIC-205ENST00000588839 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
NFIC-205ENST00000588839 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
NFIC-205ENST00000588839 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 RPS12P25398 132 aaKnown RBP18.85■□□□□ 0.61
NFIC-205ENST00000588839 VEGFBP49765 207 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 FLIIQ13045 1269 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 DPF2Q92785 391 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 AIDAQ96BJ3 306 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 PSME4Q14997 1843 aa18.85■□□□□ 0.61
NFIC-205ENST00000588839 XDHP47989 1333 aa18.84■□□□□ 0.61
NFIC-205ENST00000588839 PSMD14O00487 310 aa18.84■□□□□ 0.61
NFIC-205ENST00000588839 C1QBPQ07021 282 aaKnown RBP18.84■□□□□ 0.61
NFIC-205ENST00000588839 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
NFIC-205ENST00000588839 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
NFIC-205ENST00000588839 COL13A1Q5TAT6 717 aaPredicted RBP18.84■□□□□ 0.61
NFIC-205ENST00000588839 MICALL2Q8IY33 904 aa18.84■□□□□ 0.61
NFIC-205ENST00000588839 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
NFIC-205ENST00000588839 SCN9AQ15858 1988 aa18.84■□□□□ 0.61
NFIC-205ENST00000588839 DOK7Q18PE1 504 aa18.83■□□□□ 0.6
NFIC-205ENST00000588839 G2E3Q7L622 706 aa18.83■□□□□ 0.6
NFIC-205ENST00000588839 RTL9Q8NET4 1388 aa18.82■□□□□ 0.6
NFIC-205ENST00000588839 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
NFIC-205ENST00000588839 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
NFIC-205ENST00000588839 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
NFIC-205ENST00000588839 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
NFIC-205ENST00000588839 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
NFIC-205ENST00000588839 POLR2AP24928 1970 aaKnown RBP18.82■□□□□ 0.6
NFIC-205ENST00000588839 TRAF5O00463 557 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 VAMP4O75379 141 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 ATP2B4P23634 1241 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 ECE1P42892 770 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
NFIC-205ENST00000588839 PAXIP1Q6ZW49 1069 aaPredicted RBP18.81■□□□□ 0.6
NFIC-205ENST00000588839 CDC37L1Q7L3B6 337 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 TNS4Q8IZW8 715 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 TTLL11Q8NHH1 800 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 TRPM4Q8TD43 1214 aa18.81■□□□□ 0.6
NFIC-205ENST00000588839 GPR101Q96P66 508 aaPredicted RBP18.81■□□□□ 0.6
NFIC-205ENST00000588839 WDR33Q9C0J8 1336 aaKnown RBP18.8■□□□□ 0.6
NFIC-205ENST00000588839 H7C1W4 665 aa18.8■□□□□ 0.6
NFIC-205ENST00000588839 GCKRQ14397 625 aa18.8■□□□□ 0.6
NFIC-205ENST00000588839 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
NFIC-205ENST00000588839 GLIS2Q9BZE0 524 aaPredicted RBP18.8■□□□□ 0.6
NFIC-205ENST00000588839 GREM2Q9H772 168 aa18.8■□□□□ 0.6
NFIC-205ENST00000588839 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
NFIC-205ENST00000588839 CELF2O95319 508 aaKnown RBP18.79■□□□□ 0.6
NFIC-205ENST00000588839 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
NFIC-205ENST00000588839 HIRAP54198 1017 aaPredicted RBP18.79■□□□□ 0.6
NFIC-205ENST00000588839 MAP2K1Q02750 393 aaPredicted RBP18.79■□□□□ 0.6
NFIC-205ENST00000588839 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
NFIC-205ENST00000588839 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
NFIC-205ENST00000588839 THSD7BQ9C0I4 1608 aa18.78■□□□□ 0.6
NFIC-205ENST00000588839 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
NFIC-205ENST00000588839 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.6
NFIC-205ENST00000588839 CST9Q5W186 159 aa18.78■□□□□ 0.6
NFIC-205ENST00000588839 ZNF609O15014 1411 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 SHTN1A0MZ66 631 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 FOXN1O15353 648 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
NFIC-205ENST00000588839 TBC1D10BQ4KMP7 808 aaPredicted RBP18.77■□□□□ 0.6
NFIC-205ENST00000588839 SAMD7Q7Z3H4 446 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 CAPNS2Q96L46 248 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 KCNQ5Q9NR82 932 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 MINPP1Q9UNW1 487 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 MED23Q9ULK4 1368 aa18.77■□□□□ 0.6
NFIC-205ENST00000588839 PODNQ7Z5L7 613 aa18.76■□□□□ 0.59
NFIC-205ENST00000588839 AGBL3Q8NEM8 1001 aa18.76■□□□□ 0.59
NFIC-205ENST00000588839 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
NFIC-205ENST00000588839 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
NFIC-205ENST00000588839 ZNF408Q9H9D4 720 aa18.76■□□□□ 0.59
NFIC-205ENST00000588839 WBP1LQ9NX94 342 aa18.76■□□□□ 0.59
NFIC-205ENST00000588839 ITGA6P23229 1130 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 GRM1Q13255 1194 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 RBM26Q5T8P6 1007 aaKnown RBP18.75■□□□□ 0.59
NFIC-205ENST00000588839 RSBN1LQ6PCB5 846 aaPredicted RBP18.75■□□□□ 0.59
NFIC-205ENST00000588839 HHIPL1Q96JK4 782 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 BEGAINQ9BUH8 593 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
NFIC-205ENST00000588839 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
NFIC-205ENST00000588839 CYP4F22Q6NT55 531 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 SAPCD2Q86UD0 394 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
NFIC-205ENST00000588839 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms