RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ZC3H12CQ9C0D7 883 aaKnown RBP18.35■□□□□ 0.53
DDX39A-208ENST00000588692 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-208ENST00000588692 PASKQ96RG2 1323 aa18.35■□□□□ 0.53
DDX39A-208ENST00000588692 RIMBP2O15034 1052 aa18.34■□□□□ 0.53
DDX39A-208ENST00000588692 RAD17O75943 681 aa18.34■□□□□ 0.53
DDX39A-208ENST00000588692 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-208ENST00000588692 ADARB2Q9NS39 739 aaKnown RBP18.34■□□□□ 0.53
DDX39A-208ENST00000588692 ECE2O60344 883 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 ALDH1L1O75891 902 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 CSF1RP07333 972 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 DBNDD1Q9H9R9 158 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 CREBZFQ9NS37 354 aa18.33■□□□□ 0.53
DDX39A-208ENST00000588692 PSME4Q14997 1843 aa18.33■□□□□ 0.52
DDX39A-208ENST00000588692 ITGBL1O95965 494 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-208ENST00000588692 ATP2B4P23634 1241 aa18.33■□□□□ 0.52
DDX39A-208ENST00000588692 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
DDX39A-208ENST00000588692 FAM161AQ3B820 660 aa18.33■□□□□ 0.52
DDX39A-208ENST00000588692 PTPRCP08575 1304 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 GRM8O00222 908 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 ITGA6P23229 1130 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
DDX39A-208ENST00000588692 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
DDX39A-208ENST00000588692 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
DDX39A-208ENST00000588692 G3V3G9 751 aa18.31■□□□□ 0.52
DDX39A-208ENST00000588692 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
DDX39A-208ENST00000588692 MAP1SQ66K74 1059 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-208ENST00000588692 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
DDX39A-208ENST00000588692 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
DDX39A-208ENST00000588692 DPF2Q92785 391 aa18.31■□□□□ 0.52
DDX39A-208ENST00000588692 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-208ENST00000588692 CT47B1P0C2W7 299 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-208ENST00000588692 RPS12P25398 132 aaKnown RBP18.3■□□□□ 0.52
DDX39A-208ENST00000588692 DOK7Q18PE1 504 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 ALDH1L2Q3SY69 923 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 MPHOSPH8Q99549 860 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-208ENST00000588692 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
DDX39A-208ENST00000588692 ZNF609O15014 1411 aa18.29■□□□□ 0.52
DDX39A-208ENST00000588692 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
DDX39A-208ENST00000588692 PSMD14O00487 310 aa18.29■□□□□ 0.52
DDX39A-208ENST00000588692 FOXO4P98177 505 aa18.29■□□□□ 0.52
DDX39A-208ENST00000588692 SSH1Q8WYL5 1049 aa18.29■□□□□ 0.52
DDX39A-208ENST00000588692 TMEM88BA6NKF7 163 aa18.28■□□□□ 0.52
DDX39A-208ENST00000588692 H7C1D1 291 aa18.28■□□□□ 0.52
DDX39A-208ENST00000588692 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
DDX39A-208ENST00000588692 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
DDX39A-208ENST00000588692 CNOT7Q9UIV1 285 aaKnown RBP18.28■□□□□ 0.52
DDX39A-208ENST00000588692 A0A1B0GUL6 1792 aa18.28■□□□□ 0.52
DDX39A-208ENST00000588692 TRPM7Q96QT4 1865 aa18.27■□□□□ 0.52
DDX39A-208ENST00000588692 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
DDX39A-208ENST00000588692 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
DDX39A-208ENST00000588692 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.52
DDX39A-208ENST00000588692 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
DDX39A-208ENST00000588692 PODNQ7Z5L7 613 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-208ENST00000588692 UTYO14607 1347 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 VIL1P09327 827 aaKnown RBP18.26■□□□□ 0.51
DDX39A-208ENST00000588692 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 KCNQ5Q9NR82 932 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
DDX39A-208ENST00000588692 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
DDX39A-208ENST00000588692 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 AGBL3Q8NEM8 1001 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
DDX39A-208ENST00000588692 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-208ENST00000588692 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-208ENST00000588692 CHRNDQ07001 517 aa18.23■□□□□ 0.51
DDX39A-208ENST00000588692 RSBN1LQ6PCB5 846 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-208ENST00000588692 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
DDX39A-208ENST00000588692 SHTN1A0MZ66 631 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 USP17L3A6NCW0 530 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 USP17L4A6NCW7 530 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-208ENST00000588692 KCNJ4P48050 445 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
DDX39A-208ENST00000588692 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-208ENST00000588692 BRPF1P55201 1214 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-208ENST00000588692 MIER1Q8N108 512 aa18.21■□□□□ 0.51
DDX39A-208ENST00000588692 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
DDX39A-208ENST00000588692 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
DDX39A-208ENST00000588692 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 RABL6Q3YEC7 729 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-208ENST00000588692 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-208ENST00000588692 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
DDX39A-208ENST00000588692 TRAF5O00463 557 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms