RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 DOK7Q18PE1 504 aa20.51■□□□□ 0.87
ERCC1-206ENST00000588300 TSPYL6Q8N831 410 aa20.51■□□□□ 0.87
ERCC1-206ENST00000588300 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
ERCC1-206ENST00000588300 HSPA8P11142 646 aaKnown RBP20.5■□□□□ 0.87
ERCC1-206ENST00000588300 SAPCD2Q86UD0 394 aa20.5■□□□□ 0.87
ERCC1-206ENST00000588300 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
ERCC1-206ENST00000588300 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
ERCC1-206ENST00000588300 ANKIB1Q9P2G1 1089 aa20.5■□□□□ 0.87
ERCC1-206ENST00000588300 MAP3K2Q9Y2U5 619 aa20.5■□□□□ 0.87
ERCC1-206ENST00000588300 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 UFL1O94874 794 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 SAMD7Q7Z3H4 446 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
ERCC1-206ENST00000588300 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
ERCC1-206ENST00000588300 STK31Q9BXU1 1019 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 ZNF408Q9H9D4 720 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 MYH3P11055 1940 aa20.49■□□□□ 0.87
ERCC1-206ENST00000588300 SCN9AQ15858 1988 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 G3V3G9 751 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 KSR2Q6VAB6 950 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 HHIPL1Q96JK4 782 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 CCDC85AQ96PX6 553 aaPredicted RBP20.48■□□□□ 0.87
ERCC1-206ENST00000588300 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
ERCC1-206ENST00000588300 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
ERCC1-206ENST00000588300 MAP2K2P36507 400 aa20.47■□□□□ 0.87
ERCC1-206ENST00000588300 NEXNQ0ZGT2 675 aa20.47■□□□□ 0.87
ERCC1-206ENST00000588300 TBC1D10BQ4KMP7 808 aaPredicted RBP20.47■□□□□ 0.87
ERCC1-206ENST00000588300 ANKRD18AQ8IVF6 992 aa20.47■□□□□ 0.87
ERCC1-206ENST00000588300 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
ERCC1-206ENST00000588300 PSME4Q14997 1843 aa20.46■□□□□ 0.87
ERCC1-206ENST00000588300 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
ERCC1-206ENST00000588300 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
ERCC1-206ENST00000588300 XDHP47989 1333 aa20.46■□□□□ 0.87
ERCC1-206ENST00000588300 AOC2O75106 756 aa20.45■□□□□ 0.86
ERCC1-206ENST00000588300 IGKV5-2P06315 115 aa20.45■□□□□ 0.86
ERCC1-206ENST00000588300 VIL1P09327 827 aaKnown RBP20.45■□□□□ 0.86
ERCC1-206ENST00000588300 CTSWP56202 376 aa20.45■□□□□ 0.86
ERCC1-206ENST00000588300 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
ERCC1-206ENST00000588300 PIAS4Q8N2W9 510 aaPredicted RBP20.45■□□□□ 0.86
ERCC1-206ENST00000588300 CDC5LQ99459 802 aaKnown RBP20.45■□□□□ 0.86
ERCC1-206ENST00000588300 SPEF2Q9C093 1822 aa20.45■□□□□ 0.86
ERCC1-206ENST00000588300 EGFRP00533 1210 aa20.44■□□□□ 0.86
ERCC1-206ENST00000588300 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
ERCC1-206ENST00000588300 KRT26Q7Z3Y9 468 aa20.44■□□□□ 0.86
ERCC1-206ENST00000588300 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
ERCC1-206ENST00000588300 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
ERCC1-206ENST00000588300 IL16Q14005 1332 aa20.44■□□□□ 0.86
ERCC1-206ENST00000588300 ZNF609O15014 1411 aa20.44■□□□□ 0.86
ERCC1-206ENST00000588300 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
ERCC1-206ENST00000588300 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
ERCC1-206ENST00000588300 CWF19L2Q2TBE0 894 aaKnown RBP20.42■□□□□ 0.86
ERCC1-206ENST00000588300 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
ERCC1-206ENST00000588300 TTLL11Q8NHH1 800 aa20.42■□□□□ 0.86
ERCC1-206ENST00000588300 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
ERCC1-206ENST00000588300 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
ERCC1-206ENST00000588300 HUNKP57058 714 aa20.41■□□□□ 0.86
ERCC1-206ENST00000588300 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
ERCC1-206ENST00000588300 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
ERCC1-206ENST00000588300 ADM5C9JUS6 153 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 CA12O43570 354 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
ERCC1-206ENST00000588300 RSBN1LQ6PCB5 846 aaPredicted RBP20.4■□□□□ 0.86
ERCC1-206ENST00000588300 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 G2E3Q7L622 706 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 GREM2Q9H772 168 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
ERCC1-206ENST00000588300 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
ERCC1-206ENST00000588300 NOGQ13253 232 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 UBE3BQ7Z3V4 1068 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 PODNQ7Z5L7 613 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 SULF1Q8IWU6 871 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 C2orf69Q8N8R5 385 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 GBA2Q9HCG7 927 aaPredicted RBP20.39■□□□□ 0.85
ERCC1-206ENST00000588300 GGA3Q9NZ52 723 aa20.39■□□□□ 0.85
ERCC1-206ENST00000588300 MED23Q9ULK4 1368 aa20.38■□□□□ 0.85
ERCC1-206ENST00000588300 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-206ENST00000588300 FLIIQ13045 1269 aa20.38■□□□□ 0.85
ERCC1-206ENST00000588300 TSKSQ9UJT2 592 aa20.38■□□□□ 0.85
ERCC1-206ENST00000588300 MINPP1Q9UNW1 487 aa20.38■□□□□ 0.85
ERCC1-206ENST00000588300 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
ERCC1-206ENST00000588300 USP17L3A6NCW0 530 aa20.37■□□□□ 0.85
ERCC1-206ENST00000588300 USP17L4A6NCW7 530 aa20.37■□□□□ 0.85
ERCC1-206ENST00000588300 H7C1W4 665 aa20.37■□□□□ 0.85
ERCC1-206ENST00000588300 USP17L1Q7RTZ2 530 aa20.37■□□□□ 0.85
ERCC1-206ENST00000588300 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
ERCC1-206ENST00000588300 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
ERCC1-206ENST00000588300 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-206ENST00000588300 GCKRQ14397 625 aa20.36■□□□□ 0.85
ERCC1-206ENST00000588300 RGMBQ6NW40 437 aa20.36■□□□□ 0.85
ERCC1-206ENST00000588300 ABHD8Q96I13 439 aa20.36■□□□□ 0.85
ERCC1-206ENST00000588300 MYH16Q9H6N6 1097 aa20.36■□□□□ 0.85
ERCC1-206ENST00000588300 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
ERCC1-206ENST00000588300 ANP32CO43423 234 aa20.35■□□□□ 0.85
ERCC1-206ENST00000588300 USP17L8P0C7I0 530 aa20.35■□□□□ 0.85
ERCC1-206ENST00000588300 SCARF1Q14162 830 aa20.35■□□□□ 0.85
ERCC1-206ENST00000588300 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms