RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 POLR2AP24928 1970 aaKnown RBP18■□□□□ 0.47
CLPTM1-208ENST00000588274 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
CLPTM1-208ENST00000588274 RIMBP2O15034 1052 aa18■□□□□ 0.47
CLPTM1-208ENST00000588274 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
CLPTM1-208ENST00000588274 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
CLPTM1-208ENST00000588274 KRT26Q7Z3Y9 468 aa18■□□□□ 0.47
CLPTM1-208ENST00000588274 CFAP44Q96MT7 982 aa18■□□□□ 0.47
CLPTM1-208ENST00000588274 VIL1P09327 827 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-208ENST00000588274 DOK7Q18PE1 504 aa17.99■□□□□ 0.47
CLPTM1-208ENST00000588274 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
CLPTM1-208ENST00000588274 HYPKQ9NX55 129 aa17.99■□□□□ 0.47
CLPTM1-208ENST00000588274 LAS1LQ9Y4W2 734 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-208ENST00000588274 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 RGMBQ6NW40 437 aa17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 GBA2Q9HCG7 927 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
CLPTM1-208ENST00000588274 MLLT1Q03111 559 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-208ENST00000588274 KIF4BQ2VIQ3 1234 aa17.97■□□□□ 0.47
CLPTM1-208ENST00000588274 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-208ENST00000588274 GGA3Q9NZ52 723 aa17.97■□□□□ 0.47
CLPTM1-208ENST00000588274 SLC10A3P09131 477 aa17.96■□□□□ 0.47
CLPTM1-208ENST00000588274 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
CLPTM1-208ENST00000588274 GMLQ99445 158 aa17.96■□□□□ 0.47
CLPTM1-208ENST00000588274 EYA3Q99504 573 aa17.96■□□□□ 0.47
CLPTM1-208ENST00000588274 SAGE1Q9NXZ1 904 aa17.96■□□□□ 0.47
CLPTM1-208ENST00000588274 PAPPA2Q9BXP8 1791 aa17.95■□□□□ 0.46
CLPTM1-208ENST00000588274 UFL1O94874 794 aa17.94■□□□□ 0.46
CLPTM1-208ENST00000588274 KIF23Q02241 960 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-208ENST00000588274 DGKZQ13574 1117 aa17.94■□□□□ 0.46
CLPTM1-208ENST00000588274 RBM26Q5T8P6 1007 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-208ENST00000588274 CDCA5Q96FF9 252 aa17.94■□□□□ 0.46
CLPTM1-208ENST00000588274 WTIPA6NIX2 430 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-208ENST00000588274 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-208ENST00000588274 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
CLPTM1-208ENST00000588274 RSBN1LQ6PCB5 846 aaPredicted RBP17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 MYD88Q99836 296 aa17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 RNF186Q9NXI6 227 aa17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 HTTP42858 3142 aa17.92■□□□□ 0.46
CLPTM1-208ENST00000588274 ZNF157P51786 506 aaPredicted RBP17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 GOLGA2Q08379 1002 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 C2orf69Q8N8R5 385 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 C8orf58Q8NAV2 365 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 CCDC102AQ96A19 550 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
CLPTM1-208ENST00000588274 PDE8AO60658 829 aa17.9■□□□□ 0.46
CLPTM1-208ENST00000588274 ANGEL2Q5VTE6 544 aaKnown RBP17.9■□□□□ 0.46
CLPTM1-208ENST00000588274 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
CLPTM1-208ENST00000588274 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 SCARF1Q14162 830 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 CCDC152Q4G0S7 254 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 SULF1Q8IWU6 871 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 ANKIB1Q9P2G1 1089 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 XDHP47989 1333 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 PITPNM2Q9BZ72 1349 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
CLPTM1-208ENST00000588274 MYH3P11055 1940 aa17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 AKAP11Q9UKA4 1901 aa17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 TRPA1O75762 1119 aa17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 MYOZ2Q9NPC6 264 aa17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
CLPTM1-208ENST00000588274 APAF1O14727 1248 aa17.87■□□□□ 0.45
CLPTM1-208ENST00000588274 MOB2Q70IA6 237 aa17.87■□□□□ 0.45
CLPTM1-208ENST00000588274 TSPYL6Q8N831 410 aa17.87■□□□□ 0.45
CLPTM1-208ENST00000588274 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
CLPTM1-208ENST00000588274 SCAF8Q9UPN6 1271 aaKnown RBP17.87■□□□□ 0.45
CLPTM1-208ENST00000588274 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
CLPTM1-208ENST00000588274 CTSWP56202 376 aa17.86■□□□□ 0.45
CLPTM1-208ENST00000588274 GNAI1P63096 354 aa17.86■□□□□ 0.45
CLPTM1-208ENST00000588274 FKBP1BP68106 108 aa17.86■□□□□ 0.45
CLPTM1-208ENST00000588274 DACT2Q5SW24 774 aa17.86■□□□□ 0.45
CLPTM1-208ENST00000588274 ATP2B4P23634 1241 aa17.85■□□□□ 0.45
CLPTM1-208ENST00000588274 PODNQ7Z5L7 613 aa17.85■□□□□ 0.45
CLPTM1-208ENST00000588274 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
CLPTM1-208ENST00000588274 TTLL11Q8NHH1 800 aa17.85■□□□□ 0.45
CLPTM1-208ENST00000588274 MXD3Q9BW11 206 aa17.85■□□□□ 0.45
CLPTM1-208ENST00000588274 PDE4DIPQ5VU43 2346 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 USP17L3A6NCW0 530 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 USP17L4A6NCW7 530 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 USP17L1Q7RTZ2 530 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 GREM2Q9H772 168 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 MINPP1Q9UNW1 487 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
CLPTM1-208ENST00000588274 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms