RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 KIF23Q02241 960 aaPredicted RBP20.29■□□□□ 0.84
NCLN-203ENST00000587740 RBM26Q5T8P6 1007 aaKnown RBP20.29■□□□□ 0.84
NCLN-203ENST00000587740 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
NCLN-203ENST00000587740 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
NCLN-203ENST00000587740 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
NCLN-203ENST00000587740 ECE2O60344 883 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 CALD1Q05682 793 aaKnown RBP20.27■□□□□ 0.84
NCLN-203ENST00000587740 DOK7Q18PE1 504 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
NCLN-203ENST00000587740 C2orf69Q8N8R5 385 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 SAGE1Q9NXZ1 904 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
NCLN-203ENST00000587740 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.83
NCLN-203ENST00000587740 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
NCLN-203ENST00000587740 RPS12P25398 132 aaKnown RBP20.26■□□□□ 0.83
NCLN-203ENST00000587740 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
NCLN-203ENST00000587740 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
NCLN-203ENST00000587740 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
NCLN-203ENST00000587740 TRPA1O75762 1119 aa20.25■□□□□ 0.83
NCLN-203ENST00000587740 ZNF157P51786 506 aaPredicted RBP20.25■□□□□ 0.83
NCLN-203ENST00000587740 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
NCLN-203ENST00000587740 DCPSQ96C86 337 aaKnown RBP20.25■□□□□ 0.83
NCLN-203ENST00000587740 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
NCLN-203ENST00000587740 AKAP11Q9UKA4 1901 aa20.25■□□□□ 0.83
NCLN-203ENST00000587740 ATP5J2-PTCD1G3V325 749 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 CHL1O00533 1208 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 SLC10A3P09131 477 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
NCLN-203ENST00000587740 SOX10P56693 466 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
NCLN-203ENST00000587740 TBC1D16Q8TBP0 767 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 PCDH10Q9P2E7 1040 aa20.24■□□□□ 0.83
NCLN-203ENST00000587740 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
NCLN-203ENST00000587740 WWC1Q8IX03 1113 aa20.23■□□□□ 0.83
NCLN-203ENST00000587740 GGA3Q9NZ52 723 aa20.23■□□□□ 0.83
NCLN-203ENST00000587740 RPS8P62241 208 aaKnown RBP20.22■□□□□ 0.83
NCLN-203ENST00000587740 GNAI1P63096 354 aa20.21■□□□□ 0.83
NCLN-203ENST00000587740 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
NCLN-203ENST00000587740 EYA3Q99504 573 aa20.21■□□□□ 0.83
NCLN-203ENST00000587740 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
NCLN-203ENST00000587740 IRS4O14654 1257 aaPredicted RBP20.2■□□□□ 0.82
NCLN-203ENST00000587740 HDGFL1Q5TGJ6 251 aa20.2■□□□□ 0.82
NCLN-203ENST00000587740 SULF1Q8IWU6 871 aa20.2■□□□□ 0.82
NCLN-203ENST00000587740 ZC3H12CQ9C0D7 883 aaKnown RBP20.19■□□□□ 0.82
NCLN-203ENST00000587740 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
NCLN-203ENST00000587740 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
NCLN-203ENST00000587740 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
NCLN-203ENST00000587740 ZNF280AP59817 542 aaPredicted RBP20.18■□□□□ 0.82
NCLN-203ENST00000587740 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
NCLN-203ENST00000587740 RASAL3Q86YV0 1011 aa20.18■□□□□ 0.82
NCLN-203ENST00000587740 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
NCLN-203ENST00000587740 SCARF1Q14162 830 aa20.17■□□□□ 0.82
NCLN-203ENST00000587740 ANGEL2Q5VTE6 544 aaKnown RBP20.17■□□□□ 0.82
NCLN-203ENST00000587740 CTU1Q7Z7A3 348 aaKnown RBP20.17■□□□□ 0.82
NCLN-203ENST00000587740 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
NCLN-203ENST00000587740 IL16Q14005 1332 aa20.17■□□□□ 0.82
NCLN-203ENST00000587740 UFL1O94874 794 aa20.16■□□□□ 0.82
NCLN-203ENST00000587740 HOXB7P09629 217 aa20.16■□□□□ 0.82
NCLN-203ENST00000587740 GMLQ99445 158 aa20.16■□□□□ 0.82
NCLN-203ENST00000587740 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
NCLN-203ENST00000587740 RSBN1LQ6PCB5 846 aaPredicted RBP20.15■□□□□ 0.82
NCLN-203ENST00000587740 MOB2Q70IA6 237 aa20.15■□□□□ 0.82
NCLN-203ENST00000587740 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
NCLN-203ENST00000587740 ZNF609O15014 1411 aa20.15■□□□□ 0.82
NCLN-203ENST00000587740 PSME4Q14997 1843 aa20.15■□□□□ 0.82
NCLN-203ENST00000587740 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
NCLN-203ENST00000587740 AGBL3Q8NEM8 1001 aa20.14■□□□□ 0.81
NCLN-203ENST00000587740 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
NCLN-203ENST00000587740 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
NCLN-203ENST00000587740 GGA1Q9UJY5 639 aa20.14■□□□□ 0.81
NCLN-203ENST00000587740 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
NCLN-203ENST00000587740 HPS5Q9UPZ3 1129 aa20.13■□□□□ 0.81
NCLN-203ENST00000587740 PAPPA2Q9BXP8 1791 aa20.13■□□□□ 0.81
NCLN-203ENST00000587740 G3V3G9 751 aa20.12■□□□□ 0.81
NCLN-203ENST00000587740 DCAF8Q5TAQ9 597 aa20.12■□□□□ 0.81
NCLN-203ENST00000587740 REM2Q8IYK8 340 aaPredicted RBP20.12■□□□□ 0.81
NCLN-203ENST00000587740 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
NCLN-203ENST00000587740 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
NCLN-203ENST00000587740 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
NCLN-203ENST00000587740 FKBP1BP68106 108 aa20.11■□□□□ 0.81
NCLN-203ENST00000587740 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
NCLN-203ENST00000587740 CCDC85AQ96PX6 553 aaPredicted RBP20.11■□□□□ 0.81
NCLN-203ENST00000587740 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
NCLN-203ENST00000587740 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 UBE2Q2LH0YL09 131 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 TBC1D8O95759 1140 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
NCLN-203ENST00000587740 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
NCLN-203ENST00000587740 PRPF38BQ5VTL8 546 aaKnown RBP20.09■□□□□ 0.81
NCLN-203ENST00000587740 ZNF296Q8WUU4 475 aaPredicted RBP20.09■□□□□ 0.81
NCLN-203ENST00000587740 MYD88Q99836 296 aa20.09■□□□□ 0.81
NCLN-203ENST00000587740 USP17L3A6NCW0 530 aa20.08■□□□□ 0.81
NCLN-203ENST00000587740 USP17L4A6NCW7 530 aa20.08■□□□□ 0.81
NCLN-203ENST00000587740 PDE8AO60658 829 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms