RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF75DP51815 510 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 FGD1P98174 961 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 TFCP2Q12800 502 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 CAMK4Q16566 473 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 SARM1Q6SZW1 724 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 ILDR2Q71H61 639 aa21.87■■□□□ 1.09
DDX39A-206ENST00000587730 DHX32Q7L7V1 743 aaKnown RBP21.87■■□□□ 1.09
DDX39A-206ENST00000587730 ZNF396Q96N95 335 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-206ENST00000587730 LRRFIP1Q32MZ4 808 aaKnown RBP21.86■■□□□ 1.09
DDX39A-206ENST00000587730 EPHA10Q5JZY3 1008 aa21.86■■□□□ 1.09
DDX39A-206ENST00000587730 LUZP1Q86V48 1076 aa21.86■■□□□ 1.09
DDX39A-206ENST00000587730 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
DDX39A-206ENST00000587730 ZNF609O15014 1411 aa21.86■■□□□ 1.09
DDX39A-206ENST00000587730 STK3Q13188 491 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 SYCP1Q15431 976 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 LRP10Q7Z4F1 713 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 SPC24Q8NBT2 197 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 PLBD2Q8NHP8 589 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 TRIM5Q9C035 493 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 TFIP11Q9UBB9 837 aaKnown RBP21.85■■□□□ 1.09
DDX39A-206ENST00000587730 PYCARDQ9ULZ3 195 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 DRC7Q8IY82 874 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 AGXT2Q9BYV1 514 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 RCOR1Q9UKL0 485 aa21.85■■□□□ 1.09
DDX39A-206ENST00000587730 CYP21A2P08686 494 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 ATF3P18847 181 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 CKAP2LQ8IYA6 745 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 MPNDQ8N594 471 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 KLHDC4Q8TBB5 520 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 ZNF496Q96IT1 587 aaPredicted RBP21.84■■□□□ 1.09
DDX39A-206ENST00000587730 CHMP3Q9Y3E7 222 aa21.84■■□□□ 1.09
DDX39A-206ENST00000587730 GOLGA6L19H0YKK7 550 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 NR1I2O75469 434 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 STX1AQ16623 288 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 FAM173BQ6P4H8 233 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 FBXL16Q8N461 479 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 PGBD1Q96JS3 809 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 TAF6LQ9Y6J9 622 aa21.83■■□□□ 1.09
DDX39A-206ENST00000587730 PTGS1P23219 599 aa21.83■■□□□ 1.08
DDX39A-206ENST00000587730 PIP4K2BP78356 416 aa21.83■■□□□ 1.08
DDX39A-206ENST00000587730 CCDC73Q6ZRK6 1079 aa21.83■■□□□ 1.08
DDX39A-206ENST00000587730 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.08
DDX39A-206ENST00000587730 DNAJC2Q99543 621 aaKnown RBP21.83■■□□□ 1.08
DDX39A-206ENST00000587730 PAXBP1Q9Y5B6 917 aa21.83■■□□□ 1.08
DDX39A-206ENST00000587730 A0A087WZG4 1122 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 CTIFO43310 598 aaKnown RBP21.82■■□□□ 1.08
DDX39A-206ENST00000587730 JAK2O60674 1132 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 TOM1O60784 492 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 DHX8Q14562 1220 aaKnown RBP21.82■■□□□ 1.08
DDX39A-206ENST00000587730 RGS22Q8NE09 1264 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.82■■□□□ 1.08
DDX39A-206ENST00000587730 ZNF274Q96GC6 653 aaPredicted RBP21.82■■□□□ 1.08
DDX39A-206ENST00000587730 MRFAP1L1Q96HT8 127 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 NLRP2Q9NX02 1062 aa21.82■■□□□ 1.08
DDX39A-206ENST00000587730 CASP7P55210 303 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 CCDC186Q7Z3E2 898 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 C17orf53Q8N3J3 647 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-206ENST00000587730 DBNDD2Q9BQY9 259 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 ATG3Q9NT62 314 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 SPEF2Q9C093 1822 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 C1orf167Q5SNV9 1468 aa21.81■■□□□ 1.08
DDX39A-206ENST00000587730 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-206ENST00000587730 SCRN1Q12765 414 aa21.8■■□□□ 1.08
DDX39A-206ENST00000587730 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
DDX39A-206ENST00000587730 DCCP43146 1447 aa21.8■■□□□ 1.08
DDX39A-206ENST00000587730 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
DDX39A-206ENST00000587730 ZSCAN25Q6NSZ9 544 aa21.8■■□□□ 1.08
DDX39A-206ENST00000587730 NSUN7Q8NE18 718 aaKnown RBP21.8■■□□□ 1.08
DDX39A-206ENST00000587730 NAT10Q9H0A0 1025 aaKnown RBP21.8■■□□□ 1.08
DDX39A-206ENST00000587730 PAG1Q9NWQ8 432 aa21.8■■□□□ 1.08
DDX39A-206ENST00000587730 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
DDX39A-206ENST00000587730 SMTNL1A8MU46 457 aa21.79■■□□□ 1.08
DDX39A-206ENST00000587730 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
DDX39A-206ENST00000587730 ZMYM1Q5SVZ6 1142 aa21.79■■□□□ 1.08
DDX39A-206ENST00000587730 EDC3Q96F86 508 aaKnown RBP21.79■■□□□ 1.08
DDX39A-206ENST00000587730 ANO10Q9NW15 660 aa21.79■■□□□ 1.08
DDX39A-206ENST00000587730 CLIP2Q9UDT6 1046 aa21.79■■□□□ 1.08
DDX39A-206ENST00000587730 H7C1W4 665 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 FAM160A1Q05DH4 1040 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 ZNF710Q8N1W2 664 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 PKNOX2Q96KN3 472 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 LAMB4A4D0S4 1761 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 PTPDC1A2A3K4 754 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 RIOK3O14730 519 aaKnown RBP21.78■■□□□ 1.08
DDX39A-206ENST00000587730 CIAO1O76071 339 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 COL9A3Q14050 684 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-206ENST00000587730 DNAJC25Q9H1X3 360 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 BCL2L12Q9HB09 334 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 CTNNA3Q9UI47 895 aa21.78■■□□□ 1.08
DDX39A-206ENST00000587730 ARFGEF2Q9Y6D5 1785 aa21.77■■□□□ 1.08
DDX39A-206ENST00000587730 AFDNP55196 1824 aaKnown RBP21.77■■□□□ 1.08
DDX39A-206ENST00000587730 ANKRD7Q92527 254 aa21.77■■□□□ 1.08
DDX39A-206ENST00000587730 FBXO3Q9UK99 471 aa21.77■■□□□ 1.08
DDX39A-206ENST00000587730 MEGF6O75095 1541 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 DHX16O60231 1041 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms