RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 ADGRL2O95490 1459 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 A0A1B0GUL7 405 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 PRC1O43663 620 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 CCDC183Q5T5S1 534 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 TMTC2Q8N394 836 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 TAF5LO75529 589 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 TSG101Q99816 390 aa11.23□□□□□ -0.61
GPATCH8-205ENST00000587228 TEX35Q5T0J7 233 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 TCERG1LQ5VWI1 586 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 CACNA2D4Q7Z3S7 1137 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 MYO6Q9UM54 1294 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 USP19O94966 1318 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 KIAA1328Q86T90 577 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 CPLX3Q8WVH0 158 aa11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 RBM17Q96I25 401 aaKnown RBP11.22□□□□□ -0.61
GPATCH8-205ENST00000587228 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
GPATCH8-205ENST00000587228 KCNQ3O43525 872 aa11.21□□□□□ -0.61
GPATCH8-205ENST00000587228 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
GPATCH8-205ENST00000587228 PTPRTO14522 1441 aa11.21□□□□□ -0.61
GPATCH8-205ENST00000587228 RXRAP19793 462 aa11.21□□□□□ -0.61
GPATCH8-205ENST00000587228 PDE8AO60658 829 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 MBD4O95243 580 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 PLCG2P16885 1265 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 PLS1Q14651 629 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 SFPQP23246 707 aaKnown RBP eCLIP11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.62
GPATCH8-205ENST00000587228 METP08581 1390 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 NAPAP54920 295 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 HOXB7P09629 217 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 NF2P35240 595 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 GNAQP50148 359 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 SMC5Q8IY18 1101 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 TXLNBQ8N3L3 684 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 ZNF397Q8NF99 534 aaPredicted RBP11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
GPATCH8-205ENST00000587228 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 GNAT2P19087 354 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 MTIF2P46199 727 aaKnown RBP11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 IL17REQ8NFR9 667 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 SUCLG2Q96I99 432 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 KIF20AO95235 890 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 PRKCSHP14314 528 aaPredicted RBP11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 GCKRQ14397 625 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 FAM182BQ5T319 152 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 DDX19AQ9NUU7 478 aaKnown RBP11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 ERCC4Q92889 916 aaPredicted RBP11.19□□□□□ -0.62
GPATCH8-205ENST00000587228 AMPD3Q01432 767 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 SYCP3Q8IZU3 236 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 DENND2AQ9ULE3 1009 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CTAGE5O15320 804 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 NEFHP12036 1026 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CPA1P15085 419 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CHMLP26374 656 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 USP8P40818 1118 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC148Q8NFR7 591 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 USP25Q9UHP3 1055 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 PNMA6EA0A0J9YXQ4 647 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 H0YIN7 160 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 AFMP43652 599 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 DNA2P51530 1060 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 ANAPC15P60006 121 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 AXDND1Q5T1B0 1012 aaPredicted RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms