RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 GPC2Q8N158 579 aa24.57■■□□□ 1.52
SPHK1-204ENST00000587167 HACL1Q9UJ83 578 aa24.57■■□□□ 1.52
SPHK1-204ENST00000587167 KAZALD1Q96I82 304 aa24.56■■□□□ 1.52
SPHK1-204ENST00000587167 ITGBL1O95965 494 aaPredicted RBP24.55■■□□□ 1.52
SPHK1-204ENST00000587167 CSF1RP07333 972 aa24.55■■□□□ 1.52
SPHK1-204ENST00000587167 EPHX2P34913 555 aa24.55■■□□□ 1.52
SPHK1-204ENST00000587167 C20orf194Q5TEA3 1177 aa24.55■■□□□ 1.52
SPHK1-204ENST00000587167 JDP2Q8WYK2 163 aa24.55■■□□□ 1.52
SPHK1-204ENST00000587167 GREM2Q9H772 168 aa24.55■■□□□ 1.52
SPHK1-204ENST00000587167 GNAI3P08754 354 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 GRAPQ13588 217 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 PDE3AQ14432 1141 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 LMBR1LQ6UX01 489 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 GRAPLQ8TC17 118 aaPredicted RBP24.54■■□□□ 1.52
SPHK1-204ENST00000587167 BICC1Q9H694 974 aaKnown RBP24.54■■□□□ 1.52
SPHK1-204ENST00000587167 SEC31BQ9NQW1 1179 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 CHMP3Q9Y3E7 222 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 LTBP1Q14766 1721 aa24.54■■□□□ 1.52
SPHK1-204ENST00000587167 COG6Q9Y2V7 657 aa24.53■■□□□ 1.52
SPHK1-204ENST00000587167 ATP6V0A2Q9Y487 856 aa24.53■■□□□ 1.52
SPHK1-204ENST00000587167 RTL9Q8NET4 1388 aa24.53■■□□□ 1.52
SPHK1-204ENST00000587167 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
SPHK1-204ENST00000587167 MVPQ14764 893 aaKnown RBP24.52■■□□□ 1.52
SPHK1-204ENST00000587167 FAM161AQ3B820 660 aa24.52■■□□□ 1.52
SPHK1-204ENST00000587167 COL13A1Q5TAT6 717 aaPredicted RBP24.52■■□□□ 1.52
SPHK1-204ENST00000587167 PNMA8AQ86V59 439 aaPredicted RBP24.52■■□□□ 1.52
SPHK1-204ENST00000587167 CELF1Q92879 486 aaKnown RBP24.52■■□□□ 1.52
SPHK1-204ENST00000587167 HDAC5Q9UQL6 1122 aa24.52■■□□□ 1.52
SPHK1-204ENST00000587167 LRRFIP2Q9Y608 721 aaKnown RBP24.52■■□□□ 1.52
SPHK1-204ENST00000587167 EIF6P56537 245 aaKnown RBP24.51■■□□□ 1.51
SPHK1-204ENST00000587167 EAPPQ56P03 285 aaPredicted RBP24.51■■□□□ 1.51
SPHK1-204ENST00000587167 LARGE2Q8N3Y3 721 aa24.51■■□□□ 1.51
SPHK1-204ENST00000587167 ZBTB7BO15156 539 aaPredicted RBP24.5■■□□□ 1.51
SPHK1-204ENST00000587167 BBOX1O75936 387 aa24.5■■□□□ 1.51
SPHK1-204ENST00000587167 ITGA6P23229 1130 aa24.5■■□□□ 1.51
SPHK1-204ENST00000587167 ANKRD44Q8N8A2 993 aa24.5■■□□□ 1.51
SPHK1-204ENST00000587167 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
SPHK1-204ENST00000587167 HSPA1AP0DMV8 641 aaKnown RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 HSPA1BP0DMV9 641 aaKnown RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 RPS8P62241 208 aaKnown RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 RABL6Q3YEC7 729 aaPredicted RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 CDC5LQ99459 802 aaKnown RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 RTFDC1Q9BY42 306 aaPredicted RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
SPHK1-204ENST00000587167 A0A1B0GUL6 1792 aa24.49■■□□□ 1.51
SPHK1-204ENST00000587167 PCNTO95613 3336 aa24.48■■□□□ 1.51
SPHK1-204ENST00000587167 ANKRD18BA2A2Z9 1011 aa24.48■■□□□ 1.51
SPHK1-204ENST00000587167 ANKRD18AQ8IVF6 992 aa24.48■■□□□ 1.51
SPHK1-204ENST00000587167 MKRN1Q9UHC7 482 aaKnown RBP24.48■■□□□ 1.51
SPHK1-204ENST00000587167 DDX19BQ9UMR2 479 aa24.48■■□□□ 1.51
SPHK1-204ENST00000587167 CNTNAP1P78357 1384 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 GNAI2P04899 355 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 SCNN1DP51172 638 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 IFIT5Q13325 482 aaKnown RBP24.47■■□□□ 1.51
SPHK1-204ENST00000587167 SP8Q8IXZ3 490 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 CLEC11AQ9Y240 323 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 GJA3Q9Y6H8 435 aa24.47■■□□□ 1.51
SPHK1-204ENST00000587167 CCDC57Q2TAC2 916 aa24.46■■□□□ 1.51
SPHK1-204ENST00000587167 TMC4Q7Z404 712 aa24.46■■□□□ 1.51
SPHK1-204ENST00000587167 NIM1KQ8IY84 436 aa24.46■■□□□ 1.51
SPHK1-204ENST00000587167 TMEM88BA6NKF7 163 aa24.45■■□□□ 1.5
SPHK1-204ENST00000587167 PPIP5K2O43314 1243 aa24.45■■□□□ 1.5
SPHK1-204ENST00000587167 AOC3Q16853 763 aa24.45■■□□□ 1.5
SPHK1-204ENST00000587167 MAP1SQ66K74 1059 aaPredicted RBP24.45■■□□□ 1.5
SPHK1-204ENST00000587167 CNTROBQ8N137 903 aa24.45■■□□□ 1.5
SPHK1-204ENST00000587167 TMX4Q9H1E5 349 aaPredicted RBP24.45■■□□□ 1.5
SPHK1-204ENST00000587167 IGHMBP2P38935 993 aaKnown RBP24.44■■□□□ 1.5
SPHK1-204ENST00000587167 TAF7LQ5H9L4 462 aa24.44■■□□□ 1.5
SPHK1-204ENST00000587167 SUPT20HQ8NEM7 779 aa24.44■■□□□ 1.5
SPHK1-204ENST00000587167 C1orf115Q9H7X2 142 aa24.44■■□□□ 1.5
SPHK1-204ENST00000587167 LMOD1P29536 600 aaPredicted RBP24.43■■□□□ 1.5
SPHK1-204ENST00000587167 EPS15P42566 896 aa24.43■■□□□ 1.5
SPHK1-204ENST00000587167 ZNF594Q96JF6 807 aaPredicted RBP24.43■■□□□ 1.5
SPHK1-204ENST00000587167 DPP8Q6V1X1 898 aaPredicted RBP24.42■■□□□ 1.5
SPHK1-204ENST00000587167 MPNDQ8N594 471 aa24.42■■□□□ 1.5
SPHK1-204ENST00000587167 MPHOSPH8Q99549 860 aa24.42■■□□□ 1.5
SPHK1-204ENST00000587167 CHMP4BQ9H444 224 aaKnown RBP24.42■■□□□ 1.5
SPHK1-204ENST00000587167 ZNRF3Q9ULT6 936 aa24.42■■□□□ 1.5
SPHK1-204ENST00000587167 DUOX1Q9NRD9 1551 aa24.42■■□□□ 1.5
SPHK1-204ENST00000587167 CXCL9Q07325 125 aa24.41■■□□□ 1.5
SPHK1-204ENST00000587167 BSDC1Q9NW68 430 aaPredicted RBP24.41■■□□□ 1.5
SPHK1-204ENST00000587167 KIAA2012Q0VF49 1180 aa24.4■■□□□ 1.5
SPHK1-204ENST00000587167 ZBTB40Q9NUA8 1239 aa24.4■■□□□ 1.5
SPHK1-204ENST00000587167 USP50Q70EL3 339 aaPredicted RBP24.39■■□□□ 1.49
SPHK1-204ENST00000587167 CRBNQ96SW2 442 aa24.39■■□□□ 1.49
SPHK1-204ENST00000587167 GPRC5DQ9NZD1 345 aa24.39■■□□□ 1.49
SPHK1-204ENST00000587167 TRPM7Q96QT4 1865 aa24.38■■□□□ 1.49
SPHK1-204ENST00000587167 RFX5P48382 616 aaPredicted RBP24.38■■□□□ 1.49
SPHK1-204ENST00000587167 VEGFBP49765 207 aa24.38■■□□□ 1.49
SPHK1-204ENST00000587167 MTX1Q13505 466 aa24.38■■□□□ 1.49
SPHK1-204ENST00000587167 LDHAL6AQ6ZMR3 332 aa24.38■■□□□ 1.49
SPHK1-204ENST00000587167 KLHDC4Q8TBB5 520 aa24.38■■□□□ 1.49
SPHK1-204ENST00000587167 RASSF10A6NK89 507 aa24.37■■□□□ 1.49
SPHK1-204ENST00000587167 SRGAP3O43295 1099 aa24.37■■□□□ 1.49
SPHK1-204ENST00000587167 GPSM2P81274 684 aa24.37■■□□□ 1.49
SPHK1-204ENST00000587167 CNNM1Q9NRU3 951 aa24.37■■□□□ 1.49
SPHK1-204ENST00000587167 MINPP1Q9UNW1 487 aa24.37■■□□□ 1.49
SPHK1-204ENST00000587167 NSFL1CQ9UNZ2 370 aaKnown RBP24.37■■□□□ 1.49
SPHK1-204ENST00000587167 TNS4Q8IZW8 715 aa24.36■■□□□ 1.49
SPHK1-204ENST00000587167 PNMA6EA0A0J9YXQ4 647 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms