RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 KIF4BQ2VIQ3 1234 aa19.52■□□□□ 0.72
SF3A2-202ENST00000586396 RBM26Q5T8P6 1007 aaKnown RBP19.52■□□□□ 0.72
SF3A2-202ENST00000586396 GGA3Q9NZ52 723 aa19.52■□□□□ 0.72
SF3A2-202ENST00000586396 PCDH10Q9P2E7 1040 aa19.52■□□□□ 0.72
SF3A2-202ENST00000586396 TRPA1O75762 1119 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 HOXB7P09629 217 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 SOX10P56693 466 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 GPSM2P81274 684 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 DOK7Q18PE1 504 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 SULF1Q8IWU6 871 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 FAM89AQ96GI7 184 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 POLLQ9UGP5 575 aa19.51■□□□□ 0.71
SF3A2-202ENST00000586396 PAPPA2Q9BXP8 1791 aa19.5■□□□□ 0.71
SF3A2-202ENST00000586396 SLC10A3P09131 477 aa19.5■□□□□ 0.71
SF3A2-202ENST00000586396 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
SF3A2-202ENST00000586396 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
SF3A2-202ENST00000586396 PLBD2Q8NHP8 589 aa19.5■□□□□ 0.71
SF3A2-202ENST00000586396 SF3B3Q15393 1217 aaKnown RBP19.49■□□□□ 0.71
SF3A2-202ENST00000586396 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
SF3A2-202ENST00000586396 HDGFL1Q5TGJ6 251 aa19.49■□□□□ 0.71
SF3A2-202ENST00000586396 KCNQ5Q9NR82 932 aa19.49■□□□□ 0.71
SF3A2-202ENST00000586396 RNF186Q9NXI6 227 aa19.49■□□□□ 0.71
SF3A2-202ENST00000586396 ATP5J2-PTCD1G3V325 749 aa19.48■□□□□ 0.71
SF3A2-202ENST00000586396 ZNF853P0CG23 659 aa19.48■□□□□ 0.71
SF3A2-202ENST00000586396 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
SF3A2-202ENST00000586396 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
SF3A2-202ENST00000586396 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
SF3A2-202ENST00000586396 CENPFP49454 3210 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 G3V3G9 751 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 DCAF8Q5TAQ9 597 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 ANKRD13DQ6ZTN6 518 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 CDCA5Q96FF9 252 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 ISCA1Q9BUE6 129 aa19.47■□□□□ 0.71
SF3A2-202ENST00000586396 ZNF609O15014 1411 aa19.46■□□□□ 0.71
SF3A2-202ENST00000586396 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-202ENST00000586396 IRS4O14654 1257 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-202ENST00000586396 UFL1O94874 794 aa19.46■□□□□ 0.71
SF3A2-202ENST00000586396 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
SF3A2-202ENST00000586396 ZC3H12CQ9C0D7 883 aaKnown RBP19.46■□□□□ 0.71
SF3A2-202ENST00000586396 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-202ENST00000586396 VIL1P09327 827 aaKnown RBP19.45■□□□□ 0.7
SF3A2-202ENST00000586396 CTU1Q7Z7A3 348 aaKnown RBP19.45■□□□□ 0.7
SF3A2-202ENST00000586396 RASAL3Q86YV0 1011 aa19.45■□□□□ 0.7
SF3A2-202ENST00000586396 CSRNP1Q96S65 589 aa19.45■□□□□ 0.7
SF3A2-202ENST00000586396 ANKIB1Q9P2G1 1089 aa19.45■□□□□ 0.7
SF3A2-202ENST00000586396 DBF4Q9UBU7 674 aaPredicted RBP19.45■□□□□ 0.7
SF3A2-202ENST00000586396 SPEF2Q9C093 1822 aa19.45■□□□□ 0.7
SF3A2-202ENST00000586396 MKI67P46013 3256 aaKnown RBP19.45■□□□□ 0.7
SF3A2-202ENST00000586396 HTTP42858 3142 aa19.45■□□□□ 0.7
SF3A2-202ENST00000586396 RPS8P62241 208 aaKnown RBP19.44■□□□□ 0.7
SF3A2-202ENST00000586396 ANGEL2Q5VTE6 544 aaKnown RBP19.44■□□□□ 0.7
SF3A2-202ENST00000586396 PODXL2Q9NZ53 605 aa19.44■□□□□ 0.7
SF3A2-202ENST00000586396 CCDC27Q2M243 656 aa19.43■□□□□ 0.7
SF3A2-202ENST00000586396 REM2Q8IYK8 340 aaPredicted RBP19.43■□□□□ 0.7
SF3A2-202ENST00000586396 HYPKQ9NX55 129 aa19.43■□□□□ 0.7
SF3A2-202ENST00000586396 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
SF3A2-202ENST00000586396 BRCA2P51587 3418 aa19.42■□□□□ 0.7
SF3A2-202ENST00000586396 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
SF3A2-202ENST00000586396 RSBN1LQ6PCB5 846 aaPredicted RBP19.42■□□□□ 0.7
SF3A2-202ENST00000586396 IFT57Q9NWB7 429 aa19.42■□□□□ 0.7
SF3A2-202ENST00000586396 APAF1O14727 1248 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 ZNF280AP59817 542 aaPredicted RBP19.41■□□□□ 0.7
SF3A2-202ENST00000586396 FKBP1BP68106 108 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 SCARF1Q14162 830 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 AGBL3Q8NEM8 1001 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 MYH3P11055 1940 aa19.41■□□□□ 0.7
SF3A2-202ENST00000586396 ZNF646O15015 1829 aaPredicted RBP19.4■□□□□ 0.7
SF3A2-202ENST00000586396 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
SF3A2-202ENST00000586396 TRIM28Q13263 835 aaKnown RBP19.4■□□□□ 0.7
SF3A2-202ENST00000586396 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
SF3A2-202ENST00000586396 ZBTB38Q8NAP3 1195 aaPredicted RBP19.4■□□□□ 0.7
SF3A2-202ENST00000586396 MYOZ2Q9NPC6 264 aa19.4■□□□□ 0.7
SF3A2-202ENST00000586396 PITPNM2Q9BZ72 1349 aa19.4■□□□□ 0.7
SF3A2-202ENST00000586396 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
SF3A2-202ENST00000586396 CCDC152Q4G0S7 254 aa19.39■□□□□ 0.69
SF3A2-202ENST00000586396 RIC3Q7Z5B4 369 aa19.39■□□□□ 0.69
SF3A2-202ENST00000586396 MBIPQ9NS73 344 aa19.39■□□□□ 0.69
SF3A2-202ENST00000586396 HPS5Q9UPZ3 1129 aa19.39■□□□□ 0.69
SF3A2-202ENST00000586396 USP17L8P0C7I0 530 aa19.38■□□□□ 0.69
SF3A2-202ENST00000586396 XDHP47989 1333 aa19.38■□□□□ 0.69
SF3A2-202ENST00000586396 GNAI1P63096 354 aa19.38■□□□□ 0.69
SF3A2-202ENST00000586396 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
SF3A2-202ENST00000586396 HDAC9Q9UKV0 1011 aa19.38■□□□□ 0.69
SF3A2-202ENST00000586396 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
SF3A2-202ENST00000586396 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
SF3A2-202ENST00000586396 MOB2Q70IA6 237 aa19.36■□□□□ 0.69
SF3A2-202ENST00000586396 CCDC85AQ96PX6 553 aaPredicted RBP19.36■□□□□ 0.69
SF3A2-202ENST00000586396 SCAF8Q9UPN6 1271 aaKnown RBP19.36■□□□□ 0.69
SF3A2-202ENST00000586396 USP17L3A6NCW0 530 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 USP17L4A6NCW7 530 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 USP17L1Q7RTZ2 530 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 ZNF296Q8WUU4 475 aaPredicted RBP19.35■□□□□ 0.69
SF3A2-202ENST00000586396 GMLQ99445 158 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 MYD88Q99836 296 aa19.35■□□□□ 0.69
SF3A2-202ENST00000586396 IL16Q14005 1332 aa19.34■□□□□ 0.69
SF3A2-202ENST00000586396 PDE8AO60658 829 aa19.34■□□□□ 0.69
SF3A2-202ENST00000586396 TBC1D8O95759 1140 aa19.34■□□□□ 0.69
SF3A2-202ENST00000586396 TTLL12Q14166 644 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms