RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 MICALL2Q8IY33 904 aa29.61■■■□□ 2.33
LSM7-203ENST00000585409 ISCA1Q9BUE6 129 aa29.61■■■□□ 2.33
LSM7-203ENST00000585409 H7C1D1 291 aa29.6■■■□□ 2.33
LSM7-203ENST00000585409 TSPYL6Q8N831 410 aa29.6■■■□□ 2.33
LSM7-203ENST00000585409 DPF2Q92785 391 aa29.6■■■□□ 2.33
LSM7-203ENST00000585409 ZNF408Q9H9D4 720 aa29.6■■■□□ 2.33
LSM7-203ENST00000585409 WASHC4Q2M389 1173 aa29.59■■■□□ 2.33
LSM7-203ENST00000585409 FAM161AQ3B820 660 aa29.59■■■□□ 2.33
LSM7-203ENST00000585409 CELF1Q92879 486 aaKnown RBP29.59■■■□□ 2.33
LSM7-203ENST00000585409 ANKRD13DQ6ZTN6 518 aa29.58■■■□□ 2.33
LSM7-203ENST00000585409 ZNF428Q96B54 188 aa29.58■■■□□ 2.33
LSM7-203ENST00000585409 FAM89AQ96GI7 184 aa29.58■■■□□ 2.33
LSM7-203ENST00000585409 ZBTB12Q9Y330 459 aaPredicted RBP29.58■■■□□ 2.33
LSM7-203ENST00000585409 PSMD14O00487 310 aa29.57■■■□□ 2.32
LSM7-203ENST00000585409 NSFL1CQ9UNZ2 370 aaKnown RBP29.57■■■□□ 2.32
LSM7-203ENST00000585409 VAMP4O75379 141 aa29.56■■■□□ 2.32
LSM7-203ENST00000585409 RGS19P49795 217 aa29.56■■■□□ 2.32
LSM7-203ENST00000585409 USP48Q86UV5 1035 aa29.56■■■□□ 2.32
LSM7-203ENST00000585409 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
LSM7-203ENST00000585409 POLLQ9UGP5 575 aa29.56■■■□□ 2.32
LSM7-203ENST00000585409 CCDC85CA6NKD9 419 aa29.55■■■□□ 2.32
LSM7-203ENST00000585409 SAMD7Q7Z3H4 446 aa29.55■■■□□ 2.32
LSM7-203ENST00000585409 TRMT2AQ8IZ69 625 aaKnown RBP29.55■■■□□ 2.32
LSM7-203ENST00000585409 DBNDD1Q9H9R9 158 aa29.55■■■□□ 2.32
LSM7-203ENST00000585409 SCN9AQ15858 1988 aa29.54■■■□□ 2.32
LSM7-203ENST00000585409 ATP5J2-PTCD1G3V325 749 aa29.54■■■□□ 2.32
LSM7-203ENST00000585409 CT47B1P0C2W7 299 aaPredicted RBP29.54■■■□□ 2.32
LSM7-203ENST00000585409 GPSM2P81274 684 aa29.54■■■□□ 2.32
LSM7-203ENST00000585409 NOGQ13253 232 aa29.54■■■□□ 2.32
LSM7-203ENST00000585409 RTL9Q8NET4 1388 aa29.53■■■□□ 2.32
LSM7-203ENST00000585409 DDX58O95786 925 aaKnown RBP29.53■■■□□ 2.32
LSM7-203ENST00000585409 EGFRP00533 1210 aa29.53■■■□□ 2.32
LSM7-203ENST00000585409 RPS12P25398 132 aaKnown RBP29.53■■■□□ 2.32
LSM7-203ENST00000585409 TRIM28Q13263 835 aaKnown RBP29.53■■■□□ 2.32
LSM7-203ENST00000585409 DLK2Q6UY11 383 aa29.53■■■□□ 2.32
LSM7-203ENST00000585409 RIMBP2O15034 1052 aa29.52■■■□□ 2.32
LSM7-203ENST00000585409 HUNKP57058 714 aa29.52■■■□□ 2.32
LSM7-203ENST00000585409 ZIC5Q96T25 663 aa29.52■■■□□ 2.32
LSM7-203ENST00000585409 C6orf229H3BNL8 230 aa29.51■■■□□ 2.31
LSM7-203ENST00000585409 ECE2O60344 883 aa29.51■■■□□ 2.31
LSM7-203ENST00000585409 TBC1D10BQ4KMP7 808 aaPredicted RBP29.51■■■□□ 2.31
LSM7-203ENST00000585409 MCOLN1Q9GZU1 580 aa29.51■■■□□ 2.31
LSM7-203ENST00000585409 KCNQ5Q9NR82 932 aa29.51■■■□□ 2.31
LSM7-203ENST00000585409 MLLT1Q03111 559 aaPredicted RBP29.5■■■□□ 2.31
LSM7-203ENST00000585409 KRT26Q7Z3Y9 468 aa29.5■■■□□ 2.31
LSM7-203ENST00000585409 EYA3Q99504 573 aa29.5■■■□□ 2.31
LSM7-203ENST00000585409 RTL5Q5HYW3 569 aaPredicted RBP29.49■■■□□ 2.31
LSM7-203ENST00000585409 TBC1D16Q8TBP0 767 aa29.49■■■□□ 2.31
LSM7-203ENST00000585409 PSME4Q14997 1843 aa29.48■■■□□ 2.31
LSM7-203ENST00000585409 FAM155AB1AL88 458 aaPredicted RBP29.48■■■□□ 2.31
LSM7-203ENST00000585409 IRS4O14654 1257 aaPredicted RBP29.48■■■□□ 2.31
LSM7-203ENST00000585409 SLC4A2P04920 1241 aa29.48■■■□□ 2.31
LSM7-203ENST00000585409 RPS8P62241 208 aaKnown RBP29.48■■■□□ 2.31
LSM7-203ENST00000585409 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
LSM7-203ENST00000585409 DOK7Q18PE1 504 aa29.47■■■□□ 2.31
LSM7-203ENST00000585409 RGMBQ6NW40 437 aa29.47■■■□□ 2.31
LSM7-203ENST00000585409 PODXL2Q9NZ53 605 aa29.47■■■□□ 2.31
LSM7-203ENST00000585409 SLC34A2O95436 690 aa29.46■■■□□ 2.31
LSM7-203ENST00000585409 DCPSQ96C86 337 aaKnown RBP29.46■■■□□ 2.31
LSM7-203ENST00000585409 GBA2Q9HCG7 927 aaPredicted RBP29.46■■■□□ 2.31
LSM7-203ENST00000585409 ADM5C9JUS6 153 aa29.45■■■□□ 2.31
LSM7-203ENST00000585409 VIL1P09327 827 aaKnown RBP29.45■■■□□ 2.31
LSM7-203ENST00000585409 ZNF609O15014 1411 aa29.45■■■□□ 2.3
LSM7-203ENST00000585409 RIC3Q7Z5B4 369 aa29.44■■■□□ 2.3
LSM7-203ENST00000585409 ZBTB38Q8NAP3 1195 aaPredicted RBP29.44■■■□□ 2.3
LSM7-203ENST00000585409 AKAP11Q9UKA4 1901 aa29.43■■■□□ 2.3
LSM7-203ENST00000585409 DGKZQ13574 1117 aa29.43■■■□□ 2.3
LSM7-203ENST00000585409 KIF4BQ2VIQ3 1234 aa29.43■■■□□ 2.3
LSM7-203ENST00000585409 RBM26Q5T8P6 1007 aaKnown RBP29.43■■■□□ 2.3
LSM7-203ENST00000585409 C2orf69Q8N8R5 385 aa29.43■■■□□ 2.3
LSM7-203ENST00000585409 PHAXQ9H814 394 aaKnown RBP29.43■■■□□ 2.3
LSM7-203ENST00000585409 ALDH1L2Q3SY69 923 aa29.42■■■□□ 2.3
LSM7-203ENST00000585409 CCDC102AQ96A19 550 aa29.42■■■□□ 2.3
LSM7-203ENST00000585409 ZC3H12CQ9C0D7 883 aaKnown RBP29.42■■■□□ 2.3
LSM7-203ENST00000585409 SEC31BQ9NQW1 1179 aa29.42■■■□□ 2.3
LSM7-203ENST00000585409 SAGE1Q9NXZ1 904 aa29.42■■■□□ 2.3
LSM7-203ENST00000585409 FLIIQ13045 1269 aa29.4■■■□□ 2.3
LSM7-203ENST00000585409 GGA3Q9NZ52 723 aa29.4■■■□□ 2.3
LSM7-203ENST00000585409 UFL1O94874 794 aa29.39■■■□□ 2.3
LSM7-203ENST00000585409 HSP90B1P14625 803 aaKnown RBP29.39■■■□□ 2.3
LSM7-203ENST00000585409 ZNF157P51786 506 aaPredicted RBP29.38■■■□□ 2.29
LSM7-203ENST00000585409 ZNF280AP59817 542 aaPredicted RBP29.38■■■□□ 2.29
LSM7-203ENST00000585409 KIF23Q02241 960 aaPredicted RBP29.38■■■□□ 2.29
LSM7-203ENST00000585409 FKBP5Q13451 457 aaPredicted RBP29.38■■■□□ 2.29
LSM7-203ENST00000585409 KSR2Q6VAB6 950 aa29.38■■■□□ 2.29
LSM7-203ENST00000585409 GGA1Q9UJY5 639 aa29.38■■■□□ 2.29
LSM7-203ENST00000585409 ASTN2O75129 1339 aaPredicted RBP29.38■■■□□ 2.29
LSM7-203ENST00000585409 PCCAP05165 728 aaPredicted RBP29.37■■■□□ 2.29
LSM7-203ENST00000585409 SLC10A3P09131 477 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 NEXNQ0ZGT2 675 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 SULF1Q8IWU6 871 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 CCDC191Q8NCU4 936 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 AGBL3Q8NEM8 1001 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 ANKIB1Q9P2G1 1089 aa29.37■■■□□ 2.29
LSM7-203ENST00000585409 CCDC152Q4G0S7 254 aa29.36■■■□□ 2.29
LSM7-203ENST00000585409 MYD88Q99836 296 aa29.36■■■□□ 2.29
LSM7-203ENST00000585409 SMC4Q9NTJ3 1288 aa29.36■■■□□ 2.29
LSM7-203ENST00000585409 PDE8AO60658 829 aa29.35■■■□□ 2.29
LSM7-203ENST00000585409 RSBN1LQ6PCB5 846 aaPredicted RBP29.35■■■□□ 2.29
LSM7-203ENST00000585409 CDCA5Q96FF9 252 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms