RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 EYA3Q99504 573 aa29.88■■■□□ 2.37
NDEL1-219ENST00000585098 GGA1Q9UJY5 639 aa29.88■■■□□ 2.37
NDEL1-219ENST00000585098 ANKRD18BA2A2Z9 1011 aa29.87■■■□□ 2.37
NDEL1-219ENST00000585098 API5Q9BZZ5 524 aaKnown RBP29.87■■■□□ 2.37
NDEL1-219ENST00000585098 MINPP1Q9UNW1 487 aa29.87■■■□□ 2.37
NDEL1-219ENST00000585098 XDHP47989 1333 aa29.87■■■□□ 2.37
NDEL1-219ENST00000585098 KIF16BQ96L93 1317 aa29.87■■■□□ 2.37
NDEL1-219ENST00000585098 LTBP1Q14766 1721 aa29.87■■■□□ 2.37
NDEL1-219ENST00000585098 IQCA1LA6NCM1 817 aa29.86■■■□□ 2.37
NDEL1-219ENST00000585098 IFIT5Q13325 482 aaKnown RBP29.86■■■□□ 2.37
NDEL1-219ENST00000585098 MPHOSPH8Q99549 860 aa29.86■■■□□ 2.37
NDEL1-219ENST00000585098 KAZALD1Q96I82 304 aa29.85■■■□□ 2.37
NDEL1-219ENST00000585098 CCT4P50991 539 aaKnown RBP29.84■■■□□ 2.37
NDEL1-219ENST00000585098 CXCL9Q07325 125 aa29.84■■■□□ 2.37
NDEL1-219ENST00000585098 ZC3H12CQ9C0D7 883 aaKnown RBP29.84■■■□□ 2.37
NDEL1-219ENST00000585098 BCAR3O75815 825 aa29.83■■■□□ 2.37
NDEL1-219ENST00000585098 ATP2B4P23634 1241 aa29.83■■■□□ 2.37
NDEL1-219ENST00000585098 CCDC57Q2TAC2 916 aa29.83■■■□□ 2.37
NDEL1-219ENST00000585098 USP44Q9H0E7 712 aa29.83■■■□□ 2.37
NDEL1-219ENST00000585098 HACL1Q9UJ83 578 aa29.83■■■□□ 2.37
NDEL1-219ENST00000585098 YDJCA8MPS7 323 aa29.82■■■□□ 2.36
NDEL1-219ENST00000585098 ARHGAP45Q92619 1136 aa29.82■■■□□ 2.36
NDEL1-219ENST00000585098 TAF1DQ9H5J8 278 aaPredicted RBP29.82■■■□□ 2.36
NDEL1-219ENST00000585098 DBNDD1Q9H9R9 158 aa29.82■■■□□ 2.36
NDEL1-219ENST00000585098 SPEF2Q9C093 1822 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 RAD17O75943 681 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 FSTL1Q12841 308 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 DOK7Q18PE1 504 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 CIAPIN1Q6FI81 312 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 SMC1BQ8NDV3 1235 aa29.81■■■□□ 2.36
NDEL1-219ENST00000585098 BICC1Q9H694 974 aaKnown RBP29.81■■■□□ 2.36
NDEL1-219ENST00000585098 WTIPA6NIX2 430 aaPredicted RBP29.8■■■□□ 2.36
NDEL1-219ENST00000585098 IPO8O15397 1037 aaKnown RBP29.79■■■□□ 2.36
NDEL1-219ENST00000585098 TAF7LQ5H9L4 462 aa29.79■■■□□ 2.36
NDEL1-219ENST00000585098 FRAT1Q92837 279 aaPredicted RBP29.79■■■□□ 2.36
NDEL1-219ENST00000585098 ZNF594Q96JF6 807 aaPredicted RBP29.79■■■□□ 2.36
NDEL1-219ENST00000585098 ANKRD2Q9GZV1 360 aa29.79■■■□□ 2.36
NDEL1-219ENST00000585098 ECE2O60344 883 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 HSPA6P17066 643 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 LMOD1P29536 600 aaPredicted RBP29.78■■■□□ 2.36
NDEL1-219ENST00000585098 EPHX2P34913 555 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 SCNN1DP51172 638 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 TNIP1Q15025 636 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 SCN4AP35499 1836 aa29.78■■■□□ 2.36
NDEL1-219ENST00000585098 G3V3G9 751 aa29.77■■■□□ 2.36
NDEL1-219ENST00000585098 POTEIP0CG38 1075 aa29.77■■■□□ 2.36
NDEL1-219ENST00000585098 POTEJP0CG39 1038 aa29.77■■■□□ 2.36
NDEL1-219ENST00000585098 CHRNDQ07001 517 aa29.77■■■□□ 2.36
NDEL1-219ENST00000585098 RABL6Q3YEC7 729 aaPredicted RBP29.77■■■□□ 2.36
NDEL1-219ENST00000585098 DCAF8Q5TAQ9 597 aa29.77■■■□□ 2.36
NDEL1-219ENST00000585098 ANKRD44Q8N8A2 993 aa29.76■■■□□ 2.35
NDEL1-219ENST00000585098 LEMD3Q9Y2U8 911 aa29.76■■■□□ 2.35
NDEL1-219ENST00000585098 EAPPQ56P03 285 aaPredicted RBP29.75■■■□□ 2.35
NDEL1-219ENST00000585098 LDHAL6AQ6ZMR3 332 aa29.75■■■□□ 2.35
NDEL1-219ENST00000585098 TRIM27P14373 513 aa29.74■■■□□ 2.35
NDEL1-219ENST00000585098 EPS15P42566 896 aa29.74■■■□□ 2.35
NDEL1-219ENST00000585098 GMPSP49915 693 aaPredicted RBP29.74■■■□□ 2.35
NDEL1-219ENST00000585098 ATF7IPQ6VMQ6 1270 aa29.74■■■□□ 2.35
NDEL1-219ENST00000585098 KCNQ5Q9NR82 932 aa29.74■■■□□ 2.35
NDEL1-219ENST00000585098 UBTFL1P0CB47 393 aaPredicted RBP29.73■■■□□ 2.35
NDEL1-219ENST00000585098 INTS3Q68E01 1043 aaKnown RBP29.73■■■□□ 2.35
NDEL1-219ENST00000585098 PNMA8AQ86V59 439 aaPredicted RBP29.73■■■□□ 2.35
NDEL1-219ENST00000585098 CNNM1Q9NRU3 951 aa29.73■■■□□ 2.35
NDEL1-219ENST00000585098 GPRC5DQ9NZD1 345 aa29.73■■■□□ 2.35
NDEL1-219ENST00000585098 TNNQ9UQP3 1299 aa29.73■■■□□ 2.35
NDEL1-219ENST00000585098 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
NDEL1-219ENST00000585098 ZNF804BA4D1E1 1349 aa29.72■■■□□ 2.35
NDEL1-219ENST00000585098 PSMD14O00487 310 aa29.72■■■□□ 2.35
NDEL1-219ENST00000585098 CHADLQ6NUI6 762 aa29.72■■■□□ 2.35
NDEL1-219ENST00000585098 LDHDQ86WU2 507 aa29.72■■■□□ 2.35
NDEL1-219ENST00000585098 HELBQ8NG08 1087 aaPredicted RBP29.72■■■□□ 2.35
NDEL1-219ENST00000585098 TAF5LO75529 589 aa29.71■■■□□ 2.35
NDEL1-219ENST00000585098 KCNJ4P48050 445 aa29.71■■■□□ 2.35
NDEL1-219ENST00000585098 ZKSCAN2Q63HK3 967 aa29.7■■■□□ 2.35
NDEL1-219ENST00000585098 CLUAP1Q96AJ1 413 aa29.7■■■□□ 2.35
NDEL1-219ENST00000585098 CLEC11AQ9Y240 323 aa29.7■■■□□ 2.35
NDEL1-219ENST00000585098 ZBTB12Q9Y330 459 aaPredicted RBP29.7■■■□□ 2.35
NDEL1-219ENST00000585098 SNAP23O00161 211 aa29.68■■■□□ 2.34
NDEL1-219ENST00000585098 KLRK1P26718 216 aa29.68■■■□□ 2.34
NDEL1-219ENST00000585098 TXNRD3Q86VQ6 643 aa29.68■■■□□ 2.34
NDEL1-219ENST00000585098 MEIS3Q99687 375 aa29.68■■■□□ 2.34
NDEL1-219ENST00000585098 PUS3Q9BZE2 481 aaKnown RBP29.68■■■□□ 2.34
NDEL1-219ENST00000585098 PLIN1O60240 522 aa29.67■■■□□ 2.34
NDEL1-219ENST00000585098 PODNQ7Z5L7 613 aa29.67■■■□□ 2.34
NDEL1-219ENST00000585098 ADARB2Q9NS39 739 aaKnown RBP29.67■■■□□ 2.34
NDEL1-219ENST00000585098 APLP1P51693 650 aa29.66■■■□□ 2.34
NDEL1-219ENST00000585098 USP50Q70EL3 339 aaPredicted RBP29.66■■■□□ 2.34
NDEL1-219ENST00000585098 HDAC5Q9UQL6 1122 aa29.66■■■□□ 2.34
NDEL1-219ENST00000585098 VIL1P09327 827 aaKnown RBP29.65■■■□□ 2.34
NDEL1-219ENST00000585098 COA1Q9GZY4 146 aa29.65■■■□□ 2.34
NDEL1-219ENST00000585098 CNOT7Q9UIV1 285 aaKnown RBP29.65■■■□□ 2.34
NDEL1-219ENST00000585098 LRRFIP2Q9Y608 721 aaKnown RBP29.65■■■□□ 2.34
NDEL1-219ENST00000585098 KLHDC4Q8TBB5 520 aa29.64■■■□□ 2.34
NDEL1-219ENST00000585098 DPF2Q92785 391 aa29.64■■■□□ 2.34
NDEL1-219ENST00000585098 RIPOR2Q9Y4F9 1068 aa29.64■■■□□ 2.34
NDEL1-219ENST00000585098 SHTN1A0MZ66 631 aa29.63■■■□□ 2.33
NDEL1-219ENST00000585098 RPS12P25398 132 aaKnown RBP29.63■■■□□ 2.33
NDEL1-219ENST00000585098 LRRC24Q50LG9 513 aa29.63■■■□□ 2.33
NDEL1-219ENST00000585098 MICALL2Q8IY33 904 aa29.63■■■□□ 2.33
NDEL1-219ENST00000585098 SCN9AQ15858 1988 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms